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Summary[edit source | edit]

  • pan ID?: SAUPAN003391000
  • symbol?:
  • description?: nucleoside-triphosphatase

      descriptions from strain specific annotations:

    • nucleoside-triphosphatase
    • non-canonical purine NTP pyrophosphatase
    • Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific)
    • deoxyribonucleotide triphosphate pyrophosphatase
    • non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
    • RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
    • Xanthosine triphosphate pyrophosphatase
  • strand?: +
  • coordinates?: 3753580..3754167
  • synteny block?: BlockID0024740
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1107 (rdgB)
    08BA02176:
    C248_1180
    11819-97:
    MS7_1108 (rdgB)
    71193:
    ST398NM01_1147
    ECT-R 2:
    ECTR2_1005 (rdgB)
    ED133:
    SAOV_1148
    ED98:
    SAAV_1119
    HO 5096 0412:
    SAEMRSA15_09810
    JH1:
    SaurJH1_1232
    JH9:
    SaurJH9_1210
    JKD6008:
    SAA6008_01105
    JKD6159:
    SAA6159_01005
    LGA251:
    SARLGA251_10630
    M013:
    M013TW_1084
    MRSA252:
    SAR1124
    MSHR1132:
    SAMSHR1132_09970
    MSSA476:
    SAS1085
    Mu3:
    SAHV_1142
    Mu50:
    SAV1152
    MW2:
    MW1034
    RF122:
    SAB1015
    ST398:
    SAPIG1147 (rdgB)
    T0131:
    SAT0131_01194 (rpsM)
    TCH60:
    HMPREF0772_12082 (ynbD)
    TW20:
    SATW20_11450
    USA300_TCH1516:
    USA300HOU_1087
    VC40:
    SAVC_04920

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MKEIVIASNNQGKINDFKVIFPDYHVIGISELIPDFDVEETGSTFEENAILKSEAAAKAL
    N315            MKEIVIASNNQGKINDFKVIFPDYHVIGISELIPDFDVEETGSTFEENAILKSEAAAKAL
    NCTC8325        MKEIVIASNNQGKINDFKVIFPDYHVIGISELIPDFDVEETGSTFEENAILKSEAAAKAL
    Newman          MKEIVIASNNQGKINDFKVIFPDYHVIGISELIPDFDVEETGSTFEENAILKSEAAAKAL
    USA300_FPR3757  MKEIVIASNNQGKINDFKVIFPDYHVIGISELIPDFDVEETGSTFEENAILKSEAAAKAL
                    ************************************************************

    COL             NKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKLGNTTDRRAQFVCVIS
    N315            NKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKLGNTTDRRAQFVCVIS
    NCTC8325        NKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKLGNTTDRRAQFVCVIS
    Newman          NKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKLGNTTDRRAQFVCVIS
    USA300_FPR3757  NKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKLGNTTDRRAQFVCVIS
                    ************************************************************

    COL             MSGPDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGQISHRRN
    N315            MSGPDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGQISHRRN
    NCTC8325        MSGPDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGQISHRRN
    Newman          MSGPDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGQISHRRN
    USA300_FPR3757  MSGPDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGQISHRRN
                    ************************************************************

    COL             AINLLQAFLEGDKNV
    N315            AINLLQAFLEGEKNV
    NCTC8325        AINLLQAFLEGDKNV
    Newman          AINLLQAFLEGDKNV
    USA300_FPR3757  AINLLQAFLEGDKNV
                    ***********:***