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Summary[edit source | edit]

  • pan ID?: SAUPAN003453000
  • symbol?: murD
  • description?: UDP-N-acetylmuramoylalanine--D-glutamate ligase

      descriptions from strain specific annotations:

    • UDP-N-acetylmuramoylalanine--D-glutamate ligase
    • UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
    • UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase
  • strand?: +
  • coordinates?: 3797286..3798650
  • synteny block?: BlockID0025330
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1196 (murD)
    N315:
    SA1026 (murD)
    NCTC8325:
    Newman:
    NWMN_1093 (murD)
    USA300_FPR3757:
    04-02981:
    SA2981_1141 (murD)
    08BA02176:
    C248_1212 (murD)
    11819-97:
    MS7_1140 (murD)
    71193:
    ST398NM01_1180
    ECT-R 2:
    ECTR2_1039 (murD)
    ED133:
    SAOV_1184
    ED98:
    SAAV_1154 (murD)
    HO 5096 0412:
    SAEMRSA15_10160 (murD)
    JH1:
    SaurJH1_1267 (murD)
    JH9:
    SaurJH9_1242 (murD)
    JKD6008:
    SAA6008_01137 (murD)
    JKD6159:
    SAA6159_01034 (murD)
    LGA251:
    SARLGA251_10940 (murD)
    M013:
    M013TW_1117
    MRSA252:
    SAR1159 (murD)
    MSHR1132:
    SAMSHR1132_10250
    MSSA476:
    SAS1117 (murD)
    Mu3:
    SAHV_1173 (murD)
    Mu50:
    SAV1183 (murD)
    MW2:
    MW1066 (murD)
    RF122:
    SAB1047 (murD)
    ST398:
    SAPIG1180 (murD)
    T0131:
    SAT0131_01228 (rplW)
    TCH60:
    HMPREF0772_12049 (murD)
    TW20:
    SATW20_11770 (murD)
    USA300_TCH1516:
    USA300HOU_1123 (murD)
    VC40:
    SAVC_05080 (murD)

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MLNYTGLENKNVLVVGLAKSGYEAAKLLSKLGANVTVNDGKDLSQDAHAKDLESMGISVV
    N315            MLNYTGLENKNVLVVGLAKSGYEAAKLLSKLGANVTVNDGKDLSQDAHAKDLESMGISVV
    NCTC8325        MLNYTGLENKNVLVVGLAKSGYEAAKLLSKLGANVTVNDGKDLSQDAHAKDLESMGISVV
    Newman          MLNYTGLENKNVLVVGLAKSGYEAAKLLSKLGANVTVNDGKDLSQDAHAKDLESMGISVV
    USA300_FPR3757  MLNYTGLENKNVLVVGLAKSGYEAAKLLSKLGANVTVNDGKDLSQDAHAKDLESMGISVV
                    ************************************************************

    COL             SGSHPLTLLDNNPIIVKNPGIPYTVSIIDEAVKRGLKILTEVELSYLISEAPIIAVTGTN
    N315            SGSHPLTLLDNNPIIVKNPGIPYTVSIIDEAVKRGLKILTEVELSYLISEAPIIAVTGTN
    NCTC8325        SGSHPLTLLDNNPIIVKNPGIPYTVSIIDEAVKRGLKILTEVELSYLISEAPIIAVTGTN
    Newman          SGSHPLTLLDNNPIIVKNPGIPYTVSIIDEAVKRGLKILTEVELSYLISEAPIIAVTGTN
    USA300_FPR3757  SGSHPLTLLDNNPIIVKNPGIPYTVSIIDEAVKRGLKILTEVELSYLISEAPIIAVTGTN
                    ************************************************************

    COL             GKTTVTSLIGDMFKKSRLTGRLSGNIGYVASKVAQEVKPTDYLVTELSSFQLLGIEKYKP
    N315            GKTTVTSLIGDMFKKSRLTGRLSGNIGYVASKVAQEVKPTDYLVTELSSFQLLGIEKYKP
    NCTC8325        GKTTVTSLIGDMFKKSRLTGRLSGNIGYVASKVAQEVKPTDYLVTELSSFQLLGIEKYKP
    Newman          GKTTVTSLIGDMFKKSRLTGRLSGNIGYVASKVAQEVKPTDYLVTELSSFQLLGIEKYKP
    USA300_FPR3757  GKTTVTSLIGDMFKKSRLTGRLSGNIGYVASKVAQEVKPTDYLVTELSSFQLLGIEKYKP
                    ************************************************************

    COL             HIAIITNIYSAHLDYHENLENYQNAKKQIYKNQTEEDYLICNYHQRQVIESEELKAKTLY
    N315            HIAIITNIYSAHLDYHENLENYQNAKKQIYKNQTEEDYLICNYHQRQVIESEELKAKTLY
    NCTC8325        HIAIITNIYSAHLDYHENLENYQNAKKQIYKNQTEEDYLICNYHQRQVIESEELKAKTLY
    Newman          HIAIITNIYSAHLDYHENLENYQNAKKQIYKNQTEEDYLICNYHQRQVIESEELKAKTLY
    USA300_FPR3757  HIAIITNIYSAHLDYHENLENYQNAKKQIYKNQTEEDYLICNYHQRQVIESEELKAKTLY
                    ************************************************************

    COL             FSTQQEVDGIYIKDGFIVYKGVRIINTEDLVLPGEHNLENILAAVLACILAGVPIKAIID
    N315            FSTQQEVDGIYIKDGFIVYKGVRIINTEDLVLPGEHNLENILAAVLACILAGVPIKAIID
    NCTC8325        FSTQQEVDGIYIKDGFIVYKGVRIINTEDLVLPGEHNLENILAAVLACILAGVPIKAIID
    Newman          FSTQQEVDGIYIKDGFIVYKGVRIINTEDLVLPGEHNLENILAAVLACILAGVPIKAIID
    USA300_FPR3757  FSTQQEVDGIYIKDGFIVYKGVRIINTEDLVLPGEHNLENILAAVLACILAGVPIKAIID
                    ************************************************************

    COL             SLTTFSGIEHRLQYVGTNRTNKYYNDSKATNTLATQFALNSFNQPIIWLCGGLDRGNEFD
    N315            SLTTFSGIEHRLQYVGTNRTNKYYNDSKATNTLATQFALNSFNQPIIWLCGGLDRGNEFD
    NCTC8325        SLTTFSGIEHRLQYVGTNRTNKYYNDSKATNTLATQFALNSFNQPIIWLCGGLDRGNEFD
    Newman          SLTTFSGIEHRLQYVGTNRTNKYYNDSKATNTLATQFALNSFNQPIIWLCGGLDRGNEFD
    USA300_FPR3757  SLTTFSGIEHRLQYVGTNRTNKYYNDSKATNTLATQFALNSFNQPIIWLCGGLDRGNEFD
                    ************************************************************

    COL             ELIPYMENVRAMVVFGQTKAKFAKLGNSQGKSVIEANNVEDAVDKVQDIIEPNDVVLLSP
    N315            ELIPYMENVRAMVVFGQTKAKFAKLGNSQGKSVIEANNVEDAVDKVQDIIEPNDVVLLSP
    NCTC8325        ELIPYMENVRAMVVFGQTKAKFAKLGNSQGKSVIEANNVEDAVDKVQDIIEPNDVVLLSP
    Newman          ELIPYMENVRAMVVFGQTKAKFAKLGNSQGKSVIEANNVEDAVDKVQDIIEPNDVVLLSP
    USA300_FPR3757  ELIPYMENVRAMVVFGQTKAKFAKLGNSQGKSVIEANNVEDAVDKVQDIIEPNDVVLLSP
                    ************************************************************

    COL             ACASWDQYSTFEERGEKFIERFRAHLPSY
    N315            ACASWDQYSTFEERGEKFIERFRAHLPSY
    NCTC8325        ACASWDQYSTFEERGEKFIERFRAHLPSY
    Newman          ACASWDQYSTFEERGEKFIERFRAHLPSY
    USA300_FPR3757  ACASWDQYSTFEERGEKFIERFRAHLPSY
                    *****************************