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Summary[edit source | edit]

  • pan ID?: SAUPAN003476000
  • symbol?: lspA
  • description?: lipoprotein signal peptidase

      descriptions from strain specific annotations:

    • lipoprotein signal peptidase
    • signal peptidase II
  • strand?: +
  • coordinates?: 3815639..3816163
  • synteny block?: BlockID0025550
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1208 (lspA)
    N315:
    SA1039 (lspA)
    NCTC8325:
    Newman:
    NWMN_1107 (lspA)
    USA300_FPR3757:
    04-02981:
    SA2981_1154 (lsp)
    08BA02176:
    C248_1225 (lspA)
    11819-97:
    MS7_1153 (lspA)
    71193:
    ST398NM01_1193
    ECT-R 2:
    ECTR2_1051 (lspA)
    ED133:
    SAOV_1199
    ED98:
    SAAV_1167 (lspA)
    HO 5096 0412:
    SAEMRSA15_10290 (lspA)
    JH1:
    SaurJH1_1280 (lspA)
    JH9:
    SaurJH9_1255 (lspA)
    JKD6008:
    SAA6008_01150 (lspA)
    JKD6159:
    SAA6159_01049 (lspA)
    LGA251:
    SARLGA251_11070 (lspA)
    M013:
    M013TW_1131
    MRSA252:
    SAR1172 (lspA)
    MSHR1132:
    SAMSHR1132_10370
    MSSA476:
    SAS1130 (lspA)
    Mu3:
    SAHV_1186 (lspA)
    Mu50:
    SAV1196 (lspA)
    MW2:
    MW1079 (lspA)
    RF122:
    SAB1060 (lspA)
    ST398:
    SAPIG1193 (lspA)
    T0131:
    SAT0131_01243
    TCH60:
    HMPREF0772_12036 (lspA)
    TW20:
    SATW20_11900 (lspA)
    USA300_TCH1516:
    USA300HOU_1133 (lspA)
    VC40:
    SAVC_05145 (lspA)

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MHKKYFIGTSILIAVFVVIFDQVTKYIIATTMKIGDSFEVIPHFLNITSHRNNGAAWGIL
    N315            MHKKYFIGTSILIAVFVVIFDQVTKYIIATTMKIGDSFEVIPHFLNITSHRNNGAAWGIL
    NCTC8325        MHKKYFIGTSILIAVFVVIFDQVTKYIIATTMKIGDSFEVIPHFLNITSHRNNGAAWGIL
    Newman          MHKKYFIGTSILIAVFVVIFDQVTKYIIATTMKIGDSFEVIPHFLNITSHRNNGAAWGIL
    USA300_FPR3757  MHKKYFIGTSILIAVFVVIFDQVTKYIIATTMKIGDSFEVIPHFLNITSHRNNGAAWGIL
                    ************************************************************

    COL             SGKMTFFFIITIIILIALVYFFIKDAQYNLFMQVAISLLFAGALGNFIDRILTGEVVDFI
    N315            SGKMTFFFIITIIILIALVYFFIKDAQYNLFMQVAISLLFAGALGNFIDRILTGEVVDFI
    NCTC8325        SGKMTFFFIITIIILIALVYFFIKDAQYNLFMQVAISLLFAGALGNFIDRILTGEVVDFI
    Newman          SGKMTFFFIITIIILIALVYFFIKDAQYNLFMQVAISLLFAGALGNFIDRILTGEVVDFI
    USA300_FPR3757  SGKMTFFFIITIIILIALVYFFIKDAQYNLFMQVAISLLFAGALGNFIDRILTGEVVDFI
                    ************************************************************

    COL             DTNIFGYDFPIFNIADSSLTIGVILIIIALLKDTSNKKEKEVK
    N315            DTNIFGYDFPIFNIADSSLTIGVILIIIALLKDTSNKKEKEVK
    NCTC8325        DTNIFGYDFPIFNIADSSLTIGVILIIIALLKDTSNKKEKEVK
    Newman          DTNIFGYDFPIFNIADSSLTIGVILIIIALLKDTSNKKEKEVK
    USA300_FPR3757  DTNIFGYDFPIFNIADSSLTIGVILIIIALLKDTSNKKEKEVK
                    *******************************************