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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003538000
- symbol?: sucD
- synonym:
- description?: succinyl-CoA synthetase subunit alpha
- succinyl-CoA synthetase subunit alpha
- succinyl-CoA ligase subunit alpha
- succinate--CoA ligase subunit alpha
- succinyl-CoA synthetase, alpha subunit
- putative succinyl-CoA ligase
- succinate--CoA ligase (ADP-forming) alpha subunit
- succinate-CoA ligase, alpha subunit subfamily
- succinyl-CoA ligase
- Succinyl-CoA ligase [ADP-forming] alpha chain
- succinyl-CoA ligase [ADP-forming] subunit alpha
- Succinyl-CoA ligase alpha chain
- succinyl-CoA synthetase alpha chain
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3877571..3878479
- synteny block?: BlockID0026150
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1204 (sucD)
08BA02176:
C248_1277
11819-97:
MS7_1204 (sucD)
6850:
RSAU_001128 (sucD)
71193:
ST398NM01_1246
ECT-R 2:
ECTR2_1102 (sucD)
ED133:
SAOV_1249
ED98:
SAAV_1220 (sucD)
HO 5096 0412:
SAEMRSA15_10790
JH1:
SaurJH1_1330
JH9:
SaurJH9_1305
JKD6008:
SAA6008_01201 (sucD)
JKD6159:
SAA6159_01101 (sucD)
LGA251:
SARLGA251_11570
M013:
M013TW_1184
MRSA252:
SAR1222
MSHR1132:
SAMSHR1132_10890
MSSA476:
SAS1180
Mu3:
SAHV_1236 (sucD)
Mu50:
SAV1246 (sucD)
MW2:
MW1129 (sucD)
RF122:
SAB1110
ST398:
SAPIG1246 (sucD)
T0131:
SAT0131_01296
TCH60:
HMPREF0772_11985 (sucD)
TW20:
SATW20_12400
USA300_TCH1516:
USA300HOU_1177 (sucD)
VC40:
SAVC_05395
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEA
N315 MSVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEA
NCTC8325 MSVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEA
Newman MSVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEA
USA300_FPR3757 MSVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEA
************************************************************
COL KNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGRKTRLV
N315 KNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGRKTRLV
NCTC8325 KNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGRKTRLV
Newman KNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGRKTRLV
USA300_FPR3757 KNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGRKTRLV
************************************************************
COL GPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGG
N315 GPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGG
NCTC8325 GPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGG
Newman GPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGG
USA300_FPR3757 GPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGG
************************************************************
COL DPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIKANMTKPVVGFIGGQTAP
N315 DPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIKANMTKPVVGFIGGQTAP
NCTC8325 DPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIKANMTKPVVGFIGGQTAP
Newman DPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIKANMTKPVVGFIGGQTAP
USA300_FPR3757 DPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIKANMTKPVVGFIGGQTAP
************************************************************
COL PGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIEAAKEAGIYESLLTV
N315 PGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIEAAKEAGIYESLLTV
NCTC8325 PGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIEAAKEAGIYESLLTV
Newman PGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIEAAKEAGIYESLLTV
USA300_FPR3757 PGKRMGHAGAIISGGKGTAEEKIKTLNSCGVKTAATPSEIGSTLIEAAKEAGIYESLLTV
************************************************************
COL NK
N315 NK
NCTC8325 NK
Newman NK
USA300_FPR3757 NK
**