PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003689000
• symbol^?: —
• synonym:
• description^?: two-component sensor histidine kinase

  descriptions from strain specific annotations:

  • two-component sensor histidine kinase
  • sensor histidine kinase
  • histidine kinase
  • putative sensor histidine kinase
  • histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
  • histidine kinase dimerisation and phosphoacceptor region
  • integral membrane sensor signal transduction histidine kinase
  • sensor histidine kinase, putative
  • sensor kinase
  • sensor kinase protein
• strand^?: +
• coordinates^?: 3995848..3997002
• synteny block^?: BlockID0027550
• occurrence^?: in 73% of 33 strains

⊟Orthologs

COL:
SACOL1354
N315:
SA1158
NCTC8325:
SAOUHSC_01313
Newman:
NWMN_1233
USA300_FPR3757:
SAUSA300_1219
04-02981:
SA2981_1276
08BA02176:
—
11819-97:
—
6850:
—
71193:
—
ECT-R 2:
ECTR2_1180
ED133:
—
ED98:
SAAV_1300
HO 5096 0412:
SAEMRSA15_11680
JH1:
SaurJH1_1409
JH9:
SaurJH9_1382
JKD6008:
SAA6008_01285
JKD6159:
SAA6159_01188
LGA251:
—
M013:
—
MRSA252:
SAR1331
MSHR1132:
SAMSHR1132_11660
MSSA476:
SAS1261
Mu3:
SAHV_1310
Mu50:
SAV1321
MW2:
MW1208
RF122:
—
ST398:
—
T0131:
SAT0131_01389
TCH60:
HMPREF0772_11887
TW20:
SATW20_13230
USA300_TCH1516:
USA300HOU_1265
VC40:
SAVC_05845

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKFLKDTSIAEISSILYLIFPIAGIFFNEVYGPKWLYIISVIVFSLSYLILVIVNNRLNT
  N315            MKFLKDTSIAEISSILYLIFPIAGIFFNEVYGPKWLYIISVIVFSLSYLILVIVNNRLNT
  NCTC8325        MKFLKDTSIAEISSILYLIFPIAGIFFNEVYGPKWLYIISVIVFSLSYLILVIVNNRLNT
  Newman          MKFLKDTSIAEISSILYLIFPIAGIFFNEVYGPKWLYIISVIVFSLSYLILVIVNNRLNT
  USA300_FPR3757  MKFLKDTSIAEISSIVYLIFPIAGIFFNEVYGPKWLYIISVIVFSLSYLILVIVNNRLNT
                  ***************:********************************************
  
  COL             LMFYILLIIHYFIICYFVFSVHPMLSLFFFYSAFAVPFTFKNNVKKTATNLFILTMIICT
  N315            LMFYILLIIHYFIICYFVFSVHPMLSLFFFYSAFAVPFTFKNNVKKTATNLFILTMIICT
  NCTC8325        LMFYILLIIHYFIICYFVFSVHPMLSLFFFYSAFAVPFTFKNNVKKTATNLFILTMIICT
  Newman          LMFYILLIIHYFIICYFVFSVHPMLSLFFFYSAFAVPFTFKNNVKKTATNLFILTMIICT
  USA300_FPR3757  LMFYILLIIHYFIICYFVFSVHPMLSLFFFYSAFAVPFTFKNNVKKTATNLFILTMIICT
                  ************************************************************
  
  COL             IITYLLYNNYFVAMMVYYVVISLIMLDNFKKMKNREYQKEIAEKNRHINTLIAEQERHRI
  N315            IITYLLYNNYFVAMMVYYVVISLIMLDNFKKMKNREYQKEIAEKNRHINTLIAEQERHRI
  NCTC8325        IITYLLYNNYFVAMMVYYVVISLIMLDNFKKMKNREYQKEIAEKNRHINTLIAEQERHRI
  Newman          IITYLLYNNYFVAMMVYYVVISLIMLDNFKKMKNREYQKEIAEKNRHINTLIAEQERHRI
  USA300_FPR3757  IITYLLYNNYFVAMMVYYVVISLIMLDNFKKMKNREYQKEIAEKNRHINTLIAEQERHRI
                  ************************************************************
  
  COL             GQDLHDTLGHVFASLSLKSELAYKLIDADVEKVKAELLAINKLSRESLNKVREIIDDVKL
  N315            GQDLHDTLGHVFASLSLKSELAYKLIDTDVEKVKAELLAINKLSRESLNKVREIIDDVKL
  NCTC8325        GQDLHDTLGHVFASLSLKSELAYKLIDADVEKVKAELLAINKLSRESLNKVREIIDDVKL
  Newman          GQDLHDTLGHVFASLSLKSELAYKLIDADVEKVKAELLAINKLSRESLNKVREIIDDVKL
  USA300_FPR3757  GQDLHDTLGHVFASLSLKSELAYKLIDADVEKVKAELLAINKLSRESLNKVREIIDDVKL
                  ***************************:********************************
  
  COL             PSFIEEIDSIRKVLKDADIDFTFENKELAQVLSPTKQSMLVMITREAINNVIKHANASKV
  N315            PSFIEEIDSIRKVLKDADIDFTFENKELAQVLSPTKQSMLVMITREAINNVIKHANASKV
  NCTC8325        PSFIEEIDSIRKVLKDADIDFTFENKELAQVLSPTKQSMLVMITREAINNVIKHANASKV
  Newman          PSFIEEIDSIRKVLKDADIDFTFENKELAQVLSPTKQSMLVMITREAINNVIKHANASKV
  USA300_FPR3757  PSFIEEIDSIRKVLKDADIDFTFENKELAQVLSPTKQSMLVMITREAINNVIKHANASKV
                  ************************************************************
  
  COL             HGKLKTVNNHKLLLMIEDDGKGIDSDCEVKSISQRVQHLNGTLAVDSTNGTKIIIEISTG
  N315            HGKLKTVNNHKLLLMIEDDGKGIDSDCEVKSISQRVQHLNGTLAVDSTNGTKIIIEISTG
  NCTC8325        HGKLKTVNNHKLLLMIEDDGKGIDSDCEVKSISQRVQHLNGTLAVDSTNGTKIIIEISTG
  Newman          HGKLKTVNNHKLLLMIEDDGKGIDSDCEVKSISQRVQHLNGTLAVDSTNGTKIIIEISTG
  USA300_FPR3757  HGKLKTVNNHKLLLMIEDDGKGIDSDCEVKSISQRVQHLNGTLAVDSTNGTKIIIEISTG
                  ************************************************************
  
  COL             GIA
  N315            GIA
  NCTC8325        GIA
  Newman          GIA
  USA300_FPR3757  GIA
                  ***