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Summary[edit source | edit]

  • pan ID?: SAUPAN003701000
  • symbol?: thrC
  • description?: threonine synthase
  • strand?: +
  • coordinates?: 4005640..4006701
  • synteny block?: BlockID0027670
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1363 (thrC)
    N315:
    SA1165 (thrC)
    NCTC8325:
    Newman:
    NWMN_1241 (thrC)
    USA300_FPR3757:
    04-02981:
    SA2981_1284 (thrC)
    08BA02176:
    C248_1364 (thrC)
    11819-97:
    MS7_1288 (thrC)
    71193:
    ST398NM01_1331
    ECT-R 2:
    ECTR2_1188 (thrC)
    ED133:
    SAOV_1342 (thrC)
    ED98:
    SAAV_1309 (thrC)
    HO 5096 0412:
    SAEMRSA15_11760 (thrC)
    JH1:
    SaurJH1_1417
    JH9:
    SaurJH9_1390
    JKD6008:
    SAA6008_01294 (thrC)
    JKD6159:
    SAA6159_01196 (thrC)
    LGA251:
    SARLGA251_12380 (thrC)
    M013:
    M013TW_1277
    MRSA252:
    SAR1339 (thrC)
    MSHR1132:
    SAMSHR1132_11740
    MSSA476:
    SAS1269
    Mu3:
    SAHV_1318 (thrC)
    Mu50:
    SAV1329 (thrC)
    MW2:
    MW1216 (thrC)
    RF122:
    SAB1187 (thrC)
    ST398:
    SAPIG1331 (thrC)
    T0131:
    SAT0131_01400
    TCH60:
    HMPREF0772_11879 (thrC)
    TW20:
    SATW20_13310 (thrC)
    USA300_TCH1516:
    USA300HOU_1274 (thrC)
    VC40:
    SAVC_05885

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MRRWQGLVEEFKAHLPVNENTPKLTLNEGNTPLIHCENMSKILGIDLYVKYEGANPTGSF
    N315            MRRWQGLVEEFKAHLPVNENTPKLTLNEGNTPLIHCENMSKILGIDLYVKYEGANPTGSF
    NCTC8325        MRRWQGLVEEFKAHLPVNENTPKLTLNEGNTPLIHCENMSKILGIDLYVKYEGANPTGSF
    Newman          MRRWQGLVEEFKAHLPVNENTPKLTLNEGNTPLIHCENMSKILGIDLYVKYEGANPTGSF
    USA300_FPR3757  MRRWQGLVEEFKAHLPVNENTPKLTLNEGNTPLIHCENMSKILGIDLYVKYEGANPTGSF
                    ************************************************************

    COL             KDRGMVMAVTKAKEQGKKIVICASTGNTSASAAAYAARAGLKAIVVIPEGKIALGKLSQA
    N315            KDRGMVMAVTKAKEQGKKIVICASTGNTSASAAAYAARAGLKAIVVIPEGKIALGKLSQA
    NCTC8325        KDRGMVMAVTKAKEQGKKIVICASTGNTSASAAAYAARAGLKAIVVIPEGKIALGKLSQA
    Newman          KDRGMVMAVTKAKEQGKKIVICASTGNTSASAAAYAARAGLKAIVVIPEGKIALGKLSQA
    USA300_FPR3757  KDRGMVMAVTKAKEQGKKIVICASTGNTSASAAAYAARAGLKAIVVIPEGKIALGKLSQA
                    ************************************************************

    COL             VMYGAEIVSIEGNFDEALEIVKEIAKSGEIELVNSVNPFRIEGQKTGSFEIVQQLDGEAP
    N315            VMYGAEIVSIEGNFDEALEIVKEIAKSGEIELVNSVNPFRIEGQKTGSFEIVQQLDGEAP
    NCTC8325        VMYGAEIVSIEGNFDEALEIVKEIAKSGEIELVNSVNPFRIEGQKTGSFEIVQQLDGEAP
    Newman          VMYGAEIVSIEGNFDEALEIVKEIAKSGEIELVNSVNPFRIEGQKTGSFEIVQQLDGEAP
    USA300_FPR3757  VMYGAEIVSIEGNFDEALEIVKEIAKSGEIELVNSVNPFRIEGQKTGSFEIVQQLDGEAP
                    ************************************************************

    COL             DILAIPVGNAGNITAYWKGFKEYHEAKGSQLPKMFGFQAEGASPIVQNKVIKNPETIATA
    N315            DILAIPVGNAGNITAYWKGFKEYHEAKGSQLPKMFGFQAEGASPIVQNKVIKNPETIATA
    NCTC8325        DILAIPVGNAGNITAYWKGFKEYHEAKGSQLPKMFGFQAEGASPIVQNKVIKNPETIATA
    Newman          DILAIPVGNAGNITAYWKGFKEYHEAKGSQLPKMFGFQAEGASPIVQNKVIKNPETIATA
    USA300_FPR3757  DILAIPVGNAGNITAYWKGFKEYHEAKGSQLPKMFGFQAEGASPIVQNKVIKNPETIATA
                    ************************************************************

    COL             IRIGNPASWDKATNALKESNGLIDSVTDDEILEAYQLMTTKEGVFSEPASNASIAGLIKL
    N315            IRIGNPASWDKATNALKESNGLIDSVTDDEILEAYQLMTTKEGVFSEPASNASIAGLIKL
    NCTC8325        IRIGNPASWDKATNALKESNGLIDSVTDDEILEAYQLMTTKEGVFSEPASNASIAGLIKL
    Newman          IRIGNPASWDKATNALKESNGLIDSVTDDEILEAYQLMTTKEGVFSEPASNASIAGLIKL
    USA300_FPR3757  IRIGNPASWDKATNALKESNGLIDSVTDDEILEAYQLMTTKEGVFSEPASNASIAGLIKL
                    ************************************************************

    COL             HRQGKLPQGKKVVAILTGNGLKDPDTAISLLDNPIKPLPNDKDSIIDYIKGAL
    N315            HRQGKLPQGKKVVAILTGNGLKDPDTAISLLDNPIKPLQNDKDSIIDYIKGAL
    NCTC8325        HRQGKLPQGKKVVAILTGNGLKDPDTAISLLDNPIKPLPNDKDSIIDYIKGAL
    Newman          HRQGKLPQGKKVVAILTGNGLKDPDTAISLLDNPIKPLPNDKDSIIDYIKGAL
    USA300_FPR3757  HRQGKLPQGKKVVAILTGNGLKDPDTAISLLDNPIKPLPNDKDSIIDYIKGAL
                    ************************************** **************