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Summary[edit source | edit]

  • pan ID?: SAUPAN003859000
  • symbol?: thyA
  • description?: thymidylate synthase
  • strand?: -
  • coordinates?: 4140366..4141322
  • synteny block?: BlockID0029150
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1462 (thyA)
    N315:
    SA1260 (thyA)
    NCTC8325:
    Newman:
    NWMN_1338 (thyA)
    USA300_FPR3757:
    04-02981:
    SA2981_1381 (thyA)
    08BA02176:
    C248_1467 (thyA)
    11819-97:
    MS7_1383 (thyA)
    71193:
    ST398NM01_1428
    ECT-R 2:
    ECTR2_1283 (thyA)
    ED133:
    SAOV_1436c
    ED98:
    SAAV_1410 (thyA)
    HO 5096 0412:
    SAEMRSA15_12900 (thyA)
    JH1:
    SaurJH1_1516 (thyA)
    JH9:
    SaurJH9_1487 (thyA)
    JKD6008:
    SAA6008_01395 (thyA)
    JKD6159:
    SAA6159_01294 (thyA)
    LGA251:
    SARLGA251_13430 (thyA)
    M013:
    M013TW_1373
    MRSA252:
    SAR1440 (thyA)
    MSHR1132:
    SAMSHR1132_12690
    MSSA476:
    SAS1370 (thyA)
    Mu3:
    SAHV_1415 (thyA)
    Mu50:
    SAV1427 (thyA)
    MW2:
    MW1317 (thyA)
    RF122:
    SAB1282c (thyA)
    ST398:
    SAPIG1428 (thyA)
    T0131:
    SAT0131_01507 (guaA)
    TCH60:
    HMPREF0772_11779 (thyA)
    TW20:
    SATW20_14280 (thyA)
    USA300_TCH1516:
    USA300HOU_1364 (thyA)
    VC40:
    SAVC_06385 (thyA)

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MLNSFDAAYHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLV
    N315            MLNSFDAAYHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLV
    NCTC8325        MLNSFDAAYHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLV
    Newman          MLNSFDAAYHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLV
    USA300_FPR3757  MLNSFDAAYHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLV
                    ************************************************************

    COL             ATELLWFIKGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQ
    N315            ATELLWFIKGDTNIQYLLKYNNNIWNEWAFENYIKSDEYNGPDMTDFGHRALSDPEFNEQ
    NCTC8325        ATELLWFIKGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQ
    Newman          ATELLWFIKGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQ
    USA300_FPR3757  ATELLWFIKGDTNIQYLLKYNNNIWNEWAFENYIKSDEYKGPDMTDFGHRALSDPEFNEQ
                    ***************************************:********************

    COL             YKEQMKQFKQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDS
    N315            YKEQMKQFKQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDS
    NCTC8325        YKEQMKQFKQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDS
    Newman          YKEQMKQFKQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDS
    USA300_FPR3757  YKEQMKQFKQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDS
                    ************************************************************

    COL             RRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLT
    N315            RRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLT
    NCTC8325        RRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLT
    Newman          RRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLT
    USA300_FPR3757  RRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLT
                    ************************************************************

    COL             HLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSDKSIFDINYED
    N315            HLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSDKSIFDINYED
    NCTC8325        HLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSDKSIFDINYED
    Newman          HLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSDKSIFDINYED
    USA300_FPR3757  HLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSDKSIFDINYED
                    ************************************************************

    COL             LEIVDYESHPAIKAPIAV
    N315            LEIVDYESHPAIKAPIAV
    NCTC8325        LEIVDYESHPAIKAPIAV
    Newman          LEIVDYESHPAIKAPIAV
    USA300_FPR3757  LEIVDYESHPAIKAPIAV
                    ******************