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Summary[edit source | edit]

  • pan ID?: SAUPAN003893000
  • symbol?: ald1
  • description?: alanine dehydrogenase

      descriptions from strain specific annotations:

    • alanine dehydrogenase
    • Alanine dehydrogenase 1
    • alanine dehydrogenase 2
  • strand?: -
  • coordinates?: 4214290..4215408
  • synteny block?: BlockID0029390
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1478 (ald1)
    N315:
    NCTC8325:
    Newman:
    NWMN_1349 (ald)
    USA300_FPR3757:
    04-02981:
    SA2981_1394
    08BA02176:
    C248_1478 (ald2)
    11819-97:
    MS7_1395
    71193:
    ST398NM01_1438
    ECT-R 2:
    ECTR2_1293 (ald)
    ED133:
    SAOV_1448 (ald)
    ED98:
    SAAV_1423 (ald1)
    HO 5096 0412:
    SAEMRSA15_13010 (ald2)
    JH1:
    SaurJH1_1528
    JH9:
    SaurJH9_1499
    JKD6008:
    SAA6008_01407 (ald1)
    JKD6159:
    SAA6159_01304 (ald1)
    LGA251:
    SARLGA251_13540 (ald2)
    M013:
    M013TW_1386
    MRSA252:
    SAR1451 (ald2)
    MSHR1132:
    SAMSHR1132_12800
    MSSA476:
    SAS1382
    Mu3:
    SAHV_1427
    Mu50:
    SAV1439
    MW2:
    MW1328
    RF122:
    SAB1304c (ald)
    ST398:
    SAPIG1438 (ald)
    T0131:
    SAT0131_01527
    TCH60:
    HMPREF0772_11767 (ald2)
    TW20:
    SATW20_14390 (ald2)
    USA300_TCH1516:
    USA300HOU_1376 (ald1)
    VC40:
    SAVC_06450

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MLVAVVKELKQGEGRVACTPENVRKLTDAGHKVIVEKNAGIGSGFSNDMYEKEGAKIVTH
    N315            MLVAVVKELKQGEGRVACTPENVRKLTDAGHKVIVEKNAGIGSGFSNDMYEKEGAKIVTH
    NCTC8325        MLVAVVKELKQGEGRVACTPENVRKLTDAGHKVIVEKNAGIGSGFSNDMYEKEGAKIVTH
    Newman          MLVAVVKELKQGEGRVACTPENVRKLTDAGHKVIVEKNAGIGSGFSNDMYEKEGAKIVTH
    USA300_FPR3757  MLVAVVKELKQGEGRVACTPENVRKLTDAGHKVIVEKNAGIGSGFSNDMYEKEGAKIVTH
                    ************************************************************

    COL             EQAWEADLVIKVKEPHESEYQYFKKNQIIWGFLHLASSKEIVEKMQEVGVTAISGETIIK
    N315            EQAWEADLVIKVKEPHESEYQYFKKNQIIWGFLHLASSKEIVEKMQEVGVTAISGETIIK
    NCTC8325        EQAWEADLVIKVKEPHESEYQYFKKNQIIWGFLHLASSKEIVEKMQEVGVTAISGETIIK
    Newman          EQAWEADLVIKVKEPHESEYQYFKKNQIIWGFLHLASSKEIVEKMQEVGVTAISGETIIK
    USA300_FPR3757  EQAWEADLVIKVKEPHESEYQYFKKNQIIWGFLHLASSKEIVEKMQEVGVTAISGETIIK
                    ************************************************************

    COL             NGKAELLAPMSAIAGQRSAIMGAYYSEAQHGGQGTLVTGVHENVDIPGSTYVIFGGGVAA
    N315            NGKAELLAPMSAIAGQRSAIMGAYYSEAQHGGQGTLVTGVHENVDIPGSTYVIFGGGVAA
    NCTC8325        NGKAELLAPMSAIAGQRSAIMGAYYSEAQHGGQGTLVTGVHENVDIPGSTYVIFGGGVAA
    Newman          NGKAELLAPMSAIAGQRSAIMGAYYSEAQHGGQGTLVTGVHENVDIPGSTYVIFGGGVAA
    USA300_FPR3757  NGKAELLAPMSAIAGQRSAIMGAYYSEAQHGGQGTLVTGVHENVDIPGSTYVIFGGGVAA
                    ************************************************************

    COL             TNAANVALGLNAKVIIIELNDDRIKYLEDMYAEKDVTVVKSTPENLAEQIKKADVFISTI
    N315            TNAANVALGLNAKVIIIELNDDRIKYLEDMYAEKDVTVVKSTPENLAEQIKKADVFISTI
    NCTC8325        TNAANVALGLNAKVIIIELNDDRIKYLEDMYAEKDVTVVKSTPENLAEQIKKADVFISTI
    Newman          TNAANVALGLNAKVIIIELNDDRIKYLEDMYAEKDVTVVKSTPENLAEQIKKADVFISTI
    USA300_FPR3757  TNAANVALGLNAKVIIIELNDDRIKYLEDMYAEKDVTVVKSTPENLAEQIKKADVFISTI
                    ************************************************************

    COL             LIPGAKPPKLVTREMVKSMKKGSVLIDIAIDQGGTIETIRPTTISDPVYEEEGVIHYGVP
    N315            LIPGAKPPKLVTREMVKSMKKGSVLIDIAIDQGGTIETIRPTTISDPVYEEEGVIHYGVP
    NCTC8325        LISGAKPPKLVTREMVKSMKKGSVLIDIAIDQGGTIETIRPTTISDPVYEEEGVIHYGVP
    Newman          LIPGAKPPKLVTREMVKSMKKGSVLIDIAIDQGGTIETIRPTTISDPVYEEEGVIHYGVP
    USA300_FPR3757  LIPGAKPPKLVTREMVKSMKKGSVLIDIAIDQGGTIETIRPTTISDPVYEEEGVIHYGVP
                    **.*********************************************************

    COL             NQPGAVPRTSTMALAQGNIDYILEICDKGLEQAIKDNEALSTGVNIYQGQVTNQGLASSH
    N315            NQPGAVPRTSTMALAQGNIDYILEICDKGLEQAIKDNEALSTGVNIYQGQVTNQGLASSH
    NCTC8325        NQPGAVPRTSTMALAQGNIDYILEICDKGLEQAIKDNEALSTGVNIYQGQVTNQGLASSH
    Newman          NQPGAVPRTSTMALAQGNIDYILEICDKGLEQAIKDNEALSTGVNIYQGQVTNQGLASSH
    USA300_FPR3757  NQPGAVPRTSTMALAQGNIDYILEICDKGLEQAIKDNEALSTGVNIYQGQVTNQGLASSH
                    ************************************************************

    COL             DLDYKEILNVIE
    N315            DLDYKEILNVIE
    NCTC8325        DLDYKEILNVIE
    Newman          DLDYKEILNVIE
    USA300_FPR3757  DLDYKEILNVIE
                    ************