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Summary[edit source | edit]

  • pan ID?: SAUPAN004044000
  • symbol?: malR
  • description?: maltose operon transcriptional repressor

      descriptions from strain specific annotations:

    • maltose operon transcriptional repressor
    • Maltose operon transcriptional repressor MalR, LacI family
    • HTH-type transcriptional regulator malR (Maltose operontranscriptional repressor)
    • maltose operon repressor
  • strand?: -
  • coordinates?: 4330972..4331991
  • synteny block?: BlockID0030810
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1552 (malR)
    N315:
    SA1339 (malR)
    NCTC8325:
    Newman:
    NWMN_1415 (marR)
    USA300_FPR3757:
    04-02981:
    SA2981_1465 (malR)
    08BA02176:
    C248_1550 (malR)
    11819-97:
    MS7_1526 (malR)
    71193:
    ST398NM01_1574
    ECT-R 2:
    ECTR2_1359
    ED133:
    SAOV_1510 (malR)
    ED98:
    SAAV_1499 (malR)
    HO 5096 0412:
    SAEMRSA15_14300 (malR)
    JH1:
    SaurJH1_1596
    JH9:
    SaurJH9_1565
    JKD6008:
    SAA6008_01478 (malR)
    JKD6159:
    SAA6159_01437 (malR)
    LGA251:
    SARLGA251_14160 (malR)
    M013:
    M013TW_1524
    MRSA252:
    SAR1585 (malR)
    MSHR1132:
    SAMSHR1132_13470
    MSSA476:
    SAS1448
    Mu3:
    SAHV_1496 (malR)
    Mu50:
    SAV1508 (malR)
    MW2:
    MW1462 (malR)
    RF122:
    SAB1369c (malR)
    ST398:
    SAPIG1574
    T0131:
    SAT0131_01602
    TCH60:
    HMPREF0772_11633 (malR)
    TW20:
    SATW20_15060 (malR)
    USA300_TCH1516:
    USA300HOU_1510 (malR)
    VC40:
    SAVC_06790

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MVTIKDVALKAGVSPSTVSRVIKGNQRISEATISKVKKVMEELNYFPNTAARTLITNQTY
    N315            MVTIKDVALKAGVSPSTVSRVIKGNKRISEATISKVKKVMEELNYFPNTAARTLITNQTY
    NCTC8325        MVTIKDVALKAGVSPSTVSRVIKGNQRISEATISKVKKVMEELNYFPNTAARTLITNQTY
    Newman          MVTIKDVALKAGVSPSTVSRVIKGNQRISEATISKVKKVMEELNYFPNTAARTLITNQTY
    USA300_FPR3757  MVTIKDVALKAGVSPSTVSRVIKGNQRISEATISKVKKVMEELNYFPNTAARTLITNQTY
                    *************************:**********************************

    COL             KIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVSNNMNDLMDEVYKMIKQRM
    N315            KIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVSNNMNDLMDEVYKMIKQRM
    NCTC8325        KIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVSNNMNDLMDEVYKMIKQRM
    Newman          KIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVSNNMNDLMDEVYKMIKQRM
    USA300_FPR3757  KIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVSNNMNDLMDEVYKMIKQRM
                    ************************************************************

    COL             VDAFILLYSKENDPIKQMLIDESMPFIVIGKPTSDIDHQFTHIDNDNILASENLTRHVIE
    N315            VDAFILLYSKENDPIKQMLIDESMPFIVIGKPTSDIDHQFTHIDNDNILASENLTRHVIE
    NCTC8325        VDAFILLYSKENDPIKQMLIDESMPFIVIGKPTSDIDHQFTHIDNDNILASENLTRHVIE
    Newman          VDAFILLYSKENDPIKQMLIDESMPFIVIGKPTSDIDHQFTHIDNDNILASENLTRHVIE
    USA300_FPR3757  VDAFILLYSKENDPIKQMLIDESMPFIVIGKPTSDIDHQFTHIDNDNILASENLTRHVIE
                    ************************************************************

    COL             QGVDELIFITEKGNFEVSKDRIQGFETIASQNKINYQIIETSNEREVIFNYMQNLHTRLK
    N315            QGVDELIFITEKGNFEVSKDRIQGFETVASQFNLDYQIIETSNEREVILNYMQNLHTRLK
    NCTC8325        QGVDELIFITEKGNFEVSKDRIQGFETIASQNKINYQIIETSNEREVIFNYMQNLHTRLK
    Newman          QGVDELIFITEKGNFEVSKDRIQGFETIASQNKINYQIIETSNEREVIFNYMQNLHTRLK
    USA300_FPR3757  QGVDELIFITEKGNFEVSKDRIQGFETIASQNKINYQIIETSNEREVIFNYMQNLHTRLK
                    ***************************:*** :::*************:***********

    COL             DPNIKQAIISLDAMLHLAILSVLYELNIEIPKDVMTATFNDSYLTEIASPPQTCIDIKPR
    N315            DPNIKQAIISLDAMLHLAILSVLYELNIEIPKDVMTATFNDSYLTEIASPPQTCIDIKPR
    NCTC8325        DPNIKQAIISLDAMLHLAILSVLYELNIEIPKDVMTATFNDSYLTEIASPPQTCIDIKPR
    Newman          DPNIKQAIISLDAMLHLAILSVLYELNIEIPKDVMTATFNDSYLTEIASPPQTCIDIKPR
    USA300_FPR3757  DPNIKQAIISLDAMLHLAILSVLYELNIEIPKDVMTATFNDSYLTEIASPPQTCIDIKPR
                    ************************************************************

    COL             MLGQQAGAAILNILKNKAQDVIELVIIDTELKIRKSTQR
    N315            MLGQQAGSAILNILKNKAQDVIELVIIDTELKIRKSTQR
    NCTC8325        MLGQQAGAAILNILKNKAQDVIELVIIDTELKIRKSTQR
    Newman          MLGQQAGAAILNILKNKAQDVIELVIIDTELKIRKSTQR
    USA300_FPR3757  MLGQQAGAAILNILKNKAQDVIELVIIDTELKIRKSTQR
                    *******:*******************************