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Summary[edit source | edit]

  • pan ID?: SAUPAN004107000
  • symbol?: pepQ2
  • description?: Xaa-Pro dipeptidase

      descriptions from strain specific annotations:

    • Xaa-Pro dipeptidase
    • peptidase M24
    • proline dipeptidase
    • xaa-Pro dipeptidase (X-Pro dipeptidase) (Prolinedipeptidase) (Prolidase) (Imidodipeptidase)
    • Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific)
    • M24B family Xaa-Pro dipeptidase
    • putative peptidase
  • strand?: -
  • coordinates?: 4383620..4384681
  • synteny block?: BlockID0031370
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1488 (ypdF)
    08BA02176:
    C248_1572
    11819-97:
    MS7_1547 (pepQ1)
    71193:
    ST398NM01_1595
    ECT-R 2:
    ECTR2_1381
    ED133:
    SAOV_1530
    ED98:
    SAAV_1522
    HO 5096 0412:
    SAEMRSA15_14500
    JH1:
    SaurJH1_1621
    JH9:
    SaurJH9_1588
    JKD6008:
    SAA6008_01499
    JKD6159:
    SAA6159_01465
    LGA251:
    SARLGA251_14360
    M013:
    M013TW_1545
    MRSA252:
    SAR1607
    MSHR1132:
    SAMSHR1132_13700
    MSSA476:
    SAS1468
    Mu3:
    SAHV_1517
    Mu50:
    SAV1529
    MW2:
    MW1482
    RF122:
    SAB1402c
    ST398:
    SAPIG1595
    T0131:
    SAT0131_01623
    TCH60:
    HMPREF0772_11611 (pepQ2)
    TW20:
    SATW20_15260
    USA300_TCH1516:
    USA300HOU_1531
    VC40:
    SAVC_06895

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MSRITQVHRILEQKHLDAIIILSDYNRRYLSGFTGTSGALIISKDKQYLITDFRYIDQAT
    N315            MSRITQVHRILEQKHLDAIIILSDYNRRYLSGFTGTSGALIISKDKQYLITDFRYIDQAT
    NCTC8325        MSRITQVHRILEQKHLDAIIILSDYNRRYLSGFTGTSGALIISKDKQYLITDFRYIDQAT
    Newman          MSRITQVHRILEQKHLDAIIILSDYNRRYLSGFTGTSGALIISKDKQYLITDFRYIDQAT
    USA300_FPR3757  MSRITQVHRILEQKHLDAIIILSDYNRRYLSGFTGTSGALIISKDKQYLITDFRYIDQAT
                    ************************************************************

    COL             KQAPNYEIINRKSTIIGEIKELLHQENFENVGFEGHHVSYDTYLELNKSRISLISISNTV
    N315            KQAPNYEIINRKSTIIGEIKELLHQENFENIGFEGHHVSYDTYLELNKSRISLISISNTV
    NCTC8325        KQAPNYEIINRKSTIIGEIKELLHQENFENVGFEGHHVSYDTYLELNKSRISLISISNTV
    Newman          KQAPNYEIINRKSTIIGEIKELLHQENFENVGFEGHHVSYDTYLELNKSRISLISISNTV
    USA300_FPR3757  KQAPNYEIINRKSTIIGEIKELLHQENFENVGFEGHHVSYDTYLELNKSRISLISISNTV
                    ******************************:*****************************

    COL             DKIRDVKDADEIALIQKAANIVDETYEYILTVVKAGMTEKELKAILESKMLELGADGPSF
    N315            DKIRDVKDVDEIALIQKAANIVDETYEYILTVVKAGMTEKELKAILESKMLELGADGPSF
    NCTC8325        DKIRDVKDADEIALIQKAANIVDETYEYILTVVKAGMTEKELKAILESKMLELGADGPSF
    Newman          DKIRDVKDADEIALIQKAANIVDETYEYILTVVKAGMTEKELKAILESKMLELGADGPSF
    USA300_FPR3757  DKIRDVKDADEIALIQKAANIVDETYEYILTVVKAGMTEKELKAILESKMLELGADGPSF
                    ********.***************************************************

    COL             DTIVASGHRGALPHGVASDKIIEKGDMITLDFGAYYNGYCSDITRTFAIGEPDPKLKEIY
    N315            DTIVASGHRGALPHGVASDKIIEKGDMITLDFGAYYNGYCSDITRTFAIGEPDPKLKEIY
    NCTC8325        DTIVASGHRGALPHGVASDKIIEKGDMITLDFGAYYNGYCSDITRTFAIGEPDPKLKEIY
    Newman          DTIVASGHRGALPHGVASDKIIEKGDMITLDFGAYYNGYCSDITRTFAIGEPDPKLKEIY
    USA300_FPR3757  DTIVASGHRGALPHGVASDKIIEKGDMITLDFGAYYNGYCSDITRTFAIGEPDPKLKEIY
                    ************************************************************

    COL             QIVLESQMKAINEIRPGMTGAEADAISRNYLESKGYGKEFGHSLGHGIGLEIHEGPMLAR
    N315            QIVLESQMKAINEIRPGMTGAEADAISRNYLESKGYGKEFGHSLGHGIGLEIHEGPMLAR
    NCTC8325        QIVLESQMKAINEIRPGMTGAEADAISRNYLESKGYGKEFGHSLGHGIGLEIHEGPMLAR
    Newman          QIVLESQMKAINEIRPGMTGAEADAISRNYLESKGYGKEFGHSLGHGIGLEIHEGPMLAR
    USA300_FPR3757  QIVLESQMKAINEIRPGMTGAEADAISRNYLESKGYGKEFGHSLGHGIGLEIHEGPMLAR
                    ************************************************************

    COL             TIQDKLQVNNCVTVEPGVYIEGLGGIRIEDDILITENGCQVFTKCTKDLIVLT
    N315            TIQDKLQVNNCVTVEPGVYIEGLGGIRIEDDILITENGCQVFTKCTKDLIVLT
    NCTC8325        TIQDKLQVNNCVTVEPGVYIEGLGGIRIEDDILITENGCQVFTKCTKDLIVLT
    Newman          TIQDKLQVNNCVTVEPGVYIEGLGGIRIEDDILITENGCQVFTKCTKDLIVLT
    USA300_FPR3757  TIQDKLQVNNCVTVEPGVYIEGLGGIRIEDDILITENGCQVFTKCTKDLIVLT
                    *****************************************************