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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004175000
- symbol?: comEB
- synonym:
- description?: comE operon protein 2
- comE operon protein 2
- competence protein ComEB required for DNA binding and uptake
- late competence deaminase protein
- late competence operon required for DNA binding and uptake comEB
- dCMP deaminase
- ComE operon protein ComEB
- dCMP deaminase, Late competence protein ComEB
- deaminase
- deoxycytidylate deaminase ComEB
- Late competence protein ComEB
- putative deaminase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4440042..4440473
- synteny block?: BlockID0032050
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1547 (comEB)
08BA02176:
C248_1631
11819-97:
MS7_1606
6850:
RSAU_001453 (comEB)
71193:
ST398NM01_1654
ECT-R 2:
ECTR2_1438
ED133:
SAOV_1588
ED98:
SAAV_1580
HO 5096 0412:
SAEMRSA15_15080
JH1:
SaurJH1_1681
JH9:
SaurJH9_1646
JKD6008:
SAA6008_01559 (comEB)
JKD6159:
SAA6159_01524 (comEB)
LGA251:
SARLGA251_14940
M013:
M013TW_1603
MRSA252:
SAR1666
MSHR1132:
SAMSHR1132_14280
MSSA476:
SAS1526
Mu3:
SAHV_1576 (comEB)
Mu50:
SAV1589 (comEB)
MW2:
MW1540 (comEB)
RF122:
SAB1461c
ST398:
SAPIG1654
T0131:
SAT0131_01684
TCH60:
HMPREF0772_11552 (comEB)
TW20:
SATW20_15840
USA300_TCH1516:
USA300HOU_1590 (comEB)
VC40:
SAVC_07200
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ----------MAQSHLLALRSTCQRLSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLI
N315 MERIKWEEYFMAQSHLLALRSTCQRLSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLI
NCTC8325 ----------MAQSHLLALRSTCQRLSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLI
Newman MERIKWEEYFMAQSHLLALRSTCQRLSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLI
USA300_FPR3757 ----------MAQSHLLALRSTCQRLSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLI
**************************************************
COL EDGHCIRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAEDYH
N315 EDGHCIRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAEDYH
NCTC8325 EDGHCIRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAEDYH
Newman EDGHCIRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAEDYH
USA300_FPR3757 EDGHCIRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAEDYH
************************************************************
COL NHEYATKLLKQSGIEFKKIPFSPEYVAKYLTKG
N315 NHEYATKLLKQSGIEFKKIPFSPEYVAKYLTKG
NCTC8325 NHEYATKLLKQSGIEFKKIPFSPEYVAKYLTKG
Newman NHEYATKLLKQSGIEFKKIPFSPEYVAKYLTKG
USA300_FPR3757 NHEYATKLLKQSGIEFKKIPFSPEYVAKYLTKG
*********************************