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Summary[edit source | edit]

  • pan ID?: SAUPAN004240000
  • symbol?: apt
  • description?: adenine phosphoribosyltransferase
  • strand?: -
  • coordinates?: 4486885..4487403
  • synteny block?: BlockID0032680
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1690 (apt)
    N315:
    SA1461 (apt)
    NCTC8325:
    Newman:
    NWMN_1537 (apt)
    USA300_FPR3757:
    04-02981:
    SA2981_1593 (apt)
    08BA02176:
    C248_1678 (apt)
    11819-97:
    MS7_1650 (apt)
    71193:
    ST398NM01_1698
    ECT-R 2:
    ECTR2_1483 (apt)
    ED133:
    SAOV_1632 (apt)
    ED98:
    SAAV_1628 (apt)
    HO 5096 0412:
    SAEMRSA15_15520 (apt)
    JH1:
    SaurJH1_1725
    JH9:
    SaurJH9_1692
    JKD6008:
    SAA6008_01604 (apt)
    JKD6159:
    SAA6159_01567 (apt)
    LGA251:
    SARLGA251_15370 (apt)
    M013:
    M013TW_1655
    MRSA252:
    SAR1715 (apt)
    MSHR1132:
    SAMSHR1132_14710
    MSSA476:
    SAS1571
    Mu3:
    SAHV_1622 (apt)
    Mu50:
    SAV1635 (apt)
    MW2:
    MW1585 (apt)
    RF122:
    SAB1504c (apt)
    ST398:
    SAPIG1698 (apt)
    T0131:
    SAT0131_01734
    TCH60:
    HMPREF0772_11507 (apt)
    TW20:
    SATW20_16290 (apt)
    USA300_TCH1516:
    USA300HOU_1633 (apt)
    VC40:
    SAVC_07420

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MDLKQYVSEVQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGF
    N315            MDLKQYVSEVQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGF
    NCTC8325        MDLKQYVSEVQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGF
    Newman          MDLKQYVSEVQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGF
    USA300_FPR3757  MDLKQYVSEVQDWPKPGVSFKDITTIMDNGEAYGYATDKIVEYAKDRDVDIVVGPEARGF
                    ************************************************************

    COL             IIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDL
    N315            IIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDL
    NCTC8325        IIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDL
    Newman          IIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDL
    USA300_FPR3757  IIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDL
                    ************************************************************

    COL             LATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMSLISYDE
    N315            LATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMSLISYDE
    NCTC8325        LATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMSLISYDE
    Newman          LATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMSLISYDE
    USA300_FPR3757  LATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMSLISYDE
                    ****************************************************