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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004254000
- symbol?: mreD
- synonym:
- description?: rod shape-determining protein MreD
- rod shape-determining protein MreD
- cell shape determinant MreD
- cell shape determining protein MreD
- membrane protein
- rod shape-determining protein MreD, putative
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4501338..4501869
- synteny block?: BlockID0032820
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1606 (mreD)
08BA02176:
C248_1691
11819-97:
MS7_1663 (mreD)
6850:
RSAU_001509 (mreD)
71193:
ST398NM01_1711
ECT-R 2:
ECTR2_1496 (mreD)
ED133:
SAOV_1645
ED98:
SAAV_1641
HO 5096 0412:
SAEMRSA15_15650
JH1:
SaurJH1_1738
JH9:
SaurJH9_1705
JKD6008:
SAA6008_01617 (mreD)
JKD6159:
SAA6159_01580 (mreD)
LGA251:
SARLGA251_15500
M013:
M013TW_1668
MRSA252:
SAR1728
MSHR1132:
SAMSHR1132_14840
MSSA476:
SAS1584
Mu3:
SAHV_1635
Mu50:
SAV1648
MW2:
MW1598
RF122:
SAB1517c
ST398:
SAPIG1711 (mreD)
T0131:
SAT0131_01749 (thiD1)
TCH60:
HMPREF0772_11494 (mreD)
TW20:
SATW20_16420
USA300_TCH1516:
USA300HOU_1647
VC40:
SAVC_07485
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MRTLYYFLIGILLFYIDTAIGLLIPMHIGKFELVFVPHLTFMYILMMVVYRGFGVSLLLS
N315 MRTLYYFLIGILLFYIDTAIGLLIPMHIGKFELVFVPHLTFMYILMMVVYRGFGVSLLLS
NCTC8325 MRTLYYFLIGILLFYIDTAIGLLIPMHIGKFELVFVPHLTFMYILMMVVYRGFGVSLLLS
Newman MRTLYYFLIGILLFYIDTAIGLLIPMHIGKFELVFVPHLTFMYILMMVVYRGFGVSLLLS
USA300_FPR3757 MRTLYYFLIGILLFYIDTAIGLLIPMHIGKFELVFVPHLTFMYILMMVVYRGFGVSLLLS
************************************************************
COL IFLGVMTDVYFGSIYGVYLFGYILFLALIDRFFKIFYKDHSMLFIIILASTLLLEVYVAL
N315 IFLGVMTDVYFGSIYGVYLFGYILFLALIDRFFKIFYKDHSMLFIIILASTLLLEVYVAL
NCTC8325 IFLGVMTDVYFGSIYGVYLFGYILFLALIDRFFKIFYKDHSMLFIIILASTLLLEVYVAL
Newman IFLGVMTDVYFGSIYGVYLFGYILFLALIDRFFKIFYKDHSMLFIIILASTLLLEVYVAL
USA300_FPR3757 IFLGVMTDVYFGSIYGVYLFGYILFLALIDRFFKIFYKDHSMLFIIILASTLLLEVYVAL
************************************************************
COL IYGMLGFIQFDIIHFVVFRLLPTLIMNFVLLIMLYPLIIKFLKKTNNDIDMKRRQW
N315 IYGMLGFIQFDIIHFVVFRLLPTLIMNFVLLIMLYPLIIKFLKKTNNDIDMKRRQW
NCTC8325 IYGMLGFIQFDIIHFVVFRLLPTLIMNFVLLIMLYPLIIKFLKKTNNDIDMKRRQW
Newman IYGMLGFIQFDIIHFVVFRLLPTLIMNFVLLIMLYPLIIKFLKKTNNDIDMKRRQW
USA300_FPR3757 IYGMLGFIQFDIIHFVVFRLLPTLIMNFVLLIMLYPLIIKFLKKTNNDIDMKRRQW
********************************************************