Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN004284000
- symbol?: hemD
- synonym:
- description?: uroporphyrinogen III synthase
- uroporphyrinogen III synthase
- uroporphyrinogen III methyltransferase
- uroporphyrinogen III synthase HEM4
- uroporphyrinogen-III synthase HemD family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4528488..4529163
- synteny block?: BlockID0033080
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1629 (hemD)
08BA02176:
C248_1710 (hemD)
11819-97:
MS7_1677
6850:
RSAU_001528 (hemD)
71193:
ST398NM01_1724
ECT-R 2:
ECTR2_1510
ED133:
SAOV_1658 (hemD)
ED98:
SAAV_1656 (hemD)
HO 5096 0412:
SAEMRSA15_15800 (hemD)
JH1:
SaurJH1_1761
JH9:
SaurJH9_1727
JKD6008:
SAA6008_01637 (hemD)
JKD6159:
SAA6159_01594 (hemD)
LGA251:
SARLGA251_15620 (hemD)
M013:
M013TW_1683
MRSA252:
SAR1749 (hemD)
MSHR1132:
SAMSHR1132_14970
MSSA476:
SAS1598
Mu3:
SAHV_1656 (hemD)
Mu50:
SAV1669 (hemD)
MW2:
MW1613 (hemD)
RF122:
SAB1529c (hemD)
ST398:
SAPIG1724 (hemD)
T0131:
SAT0131_01770
TCH60:
HMPREF0772_11481 (hemD)
TW20:
SATW20_16600 (hemD)
USA300_TCH1516:
USA300HOU_1661 (hemD)
VC40:
SAVC_07555
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKPVVVMTQTNDMQSDLVSIIHKPFIDIKPLNFDIHLLNQRYDWLIFSSKNAVKFFYKYL
N315 MKPVVVMTQTNDMQSDLVSIIHKPFIDIKPLNFDIHLLNQRYDWLIFSSKNAVKFFYKYL
NCTC8325 MKPVVVMTQTNDMQSDLVSIIHKPFIDIKPLNFDIHLLNQRYDWLIFSSKNAVKFFYKYL
Newman MKPVVVMTQTNDMQSDLVSIIHKPFIDIKPLNFDIHLLNQRYDWLIFSSKNAVKFFYKYL
USA300_FPR3757 MKPVVVMTQTNDMQSDLVSIIHKPFIDIKPLNFDIHLLNQRYDWLIFSSKNAVKFFYKYL
************************************************************
COL KGINVDNIAVIGSKTAQYCESLGIRVDFMPNDFSQEGFLKSFNQTNQKILLPSSELARPL
N315 KGINVDNIAVIGSKTAQYCESLGIRVDFMPNDFSQEGFLKSFNQTNQKILLPSSELARPL
NCTC8325 KGINVDNIAVIGSKTAQYCESLGIRVDFMPNDFSQEGFLKSFNQTNQKILLPSSELARPL
Newman KGINVDNIAVIGSKTAQYCESLGIRVDFMPNDFSQEGFLKSFNQTNQKILLPSSELARPL
USA300_FPR3757 KGINVDNIAVIGSKTAQYCESLGIRVDFMPNDFSQEGFLKSFNQTNQKILLPSSELARPL
************************************************************
COL LLAALSKDNEVVKIDLYTSVPNKQNIQDVKEMIEHQQIDALTFSSSSAVRYYFNEGFVPK
N315 LLAALSKDNEVVKIDLYTSVPNKQNIQDVKEMIEHQQIDALTFSSSSAVRYYFNEGFVPK
NCTC8325 LLAALSKDNEVVKIDLYTSVPNKQNIQDVKEMIEHQQIDALTFSSSSAVRYYFNEGFVPK
Newman LLAALSKDNEVVKIDLYTSVPNKQNIQDVKEMIEHQQIDALTFSSSSAVRYYFNEGFVPK
USA300_FPR3757 LLAALSKDNEVVKIDLYTSVPNKQNIQDVKEMIEHQQIDALTFSSSSAVRYYFNEGFVPK
************************************************************
COL FKSYFAIGEQTARTIKSYQQPVTIAEIQTLESLIEKILESRG
N315 FKSYFAIGEQTARTIKTYQQPVTIAEIQTLESLIEKILESRG
NCTC8325 FKSYFAIGEQTARTIKSYQQPVTIAEIQTLESLIEKILESRG
Newman FKSYFAIGEQTARTIKSYQQPVTIAEIQTLESLIEKILESRG
USA300_FPR3757 FKSYFAIGEQTARTIKSYQQPVTIAEIQTLESLIEKILESRG
****************:*************************