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Summary[edit source | edit]

  • pan ID?: SAUPAN004362000
  • symbol?: uspA1
  • description?: universal stress protein UspA

      descriptions from strain specific annotations:

    • universal stress protein UspA
    • universal stress protein
    • universal stress protein family protein
    • putative universal stress protein
    • stress response protein
    • universal stress family protein
    • Universal stress protein family
    • UspA domain-containing protein
  • strand?: +
  • coordinates?: 4602064..4602565
  • synteny block?: BlockID0033670
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1668
    08BA02176:
    C248_1751
    11819-97:
    MS7_1716
    71193:
    ST398NM01_1763
    ECT-R 2:
    ECTR2_1550
    ED133:
    SAOV_1697
    ED98:
    SAAV_1720
    HO 5096 0412:
    SAEMRSA15_16190
    JH1:
    SaurJH1_1801
    JH9:
    SaurJH9_1766
    JKD6008:
    SAA6008_01678 (uspA_1)
    JKD6159:
    SAA6159_01634 (uspA_1)
    LGA251:
    SARLGA251_16010
    M013:
    M013TW_1723
    MRSA252:
    SAR1788
    MSHR1132:
    SAMSHR1132_15600
    MSSA476:
    SAS1637
    Mu3:
    SAHV_1696
    Mu50:
    SAV1710
    MW2:
    MW1653
    RF122:
    SAB1569
    ST398:
    SAPIG1763
    T0131:
    SAT0131_01813
    TCH60:
    HMPREF0772_11442
    TW20:
    SATW20_17010
    USA300_TCH1516:
    USA300HOU_1697
    VC40:
    SAVC_07760

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MITYKNILIAVDGSHEAEWAFNRAVGVAKRNDAKLTIVNVIDSRTYSSYEVYDAQFTEKS
    N315            MITYKNILIAVDGSHEAEWAFNRAVGVAKRNDAKLTIVNVIDSRTYSSYEVYDAQFTEKS
    NCTC8325        MITYKNILIAVDGSHEAEWAFNRAVGVAKRNDAKLTIVNVIDSRTYSSYEVYDAQFTEKS
    Newman          MITYKNILIAVDGSHEAEWAFNRAVGVAKRNDAKLTIVNVIDSRTYSSYEVYDAQFTEKS
    USA300_FPR3757  MITYKNILIAVDGSHEAEWAFNRAVGVAKRNDAKLTIVNVIDSRTYSSYEVYDAQFTEKS
                    ************************************************************

    COL             KHFAEELLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVE
    N315            KHFAEELLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVE
    NCTC8325        KHFAEELLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVE
    Newman          KHFAEELLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVE
    USA300_FPR3757  KHFAEELLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVE
                    ************************************************************

    COL             RFIVGSVSESIVRHAPCDVLVVRTEELPADFQPQVATTQLREKYQN
    N315            RFIVGSVSESIVRHAPCDVLVVRTEELPADFQPQVATTQLREKYQN
    NCTC8325        RFIVGSVSESIVRHAPCDVLVVRTEELPADFQPQVATTQLREKYQN
    Newman          RFIVGSVSESIVRHAPCDVLVVRTEELPADFQPQVATTQLREKYQN
    USA300_FPR3757  RFIVGSVSESIVRHAPCDVLVVRTEELPADFQPQVATTQLREKYQN
                    **********************************************