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Summary[edit source | edit]

  • pan ID?: SAUPAN004455000
  • symbol?: ribH
  • description?: 6,7-dimethyl-8-ribityllumazine synthase
  • strand?: -
  • coordinates?: 4702607..4703216
  • synteny block?: BlockID0034520
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1817 (ribH)
    N315:
    SA1586 (ribH)
    NCTC8325:
    Newman:
    NWMN_1659 (ribH)
    USA300_FPR3757:
    04-02981:
    SA2981_1723 (ribH)
    08BA02176:
    C248_1813 (ribH)
    11819-97:
    MS7_1771 (ribH)
    71193:
    ST398NM01_1819
    ECT-R 2:
    ECTR2_1605 (ribH)
    ED133:
    SAOV_1751 (ribH)
    ED98:
    SAAV_1777 (ribH)
    HO 5096 0412:
    SAEMRSA15_16740 (ribH)
    JH1:
    SaurJH1_1855 (ribH)
    JH9:
    SaurJH9_1820 (ribH)
    JKD6008:
    SAA6008_01740 (ribH)
    JKD6159:
    SAA6159_01688 (ribH)
    LGA251:
    SARLGA251_16550 (ribH)
    M013:
    M013TW_1781
    MRSA252:
    SAR1850 (ribH)
    MSHR1132:
    SAMSHR1132_16150
    MSSA476:
    SAS1691 (ribH)
    Mu3:
    SAHV_1753 (ribH)
    Mu50:
    SAV1767 (ribH)
    MW2:
    MW1708 (ribH)
    RF122:
    SAB1625c (ribH)
    ST398:
    SAPIG1819 (ribH)
    T0131:
    SAT0131_01882
    TCH60:
    HMPREF0772_11386 (ribH)
    TW20:
    SATW20_17580 (ribH)
    USA300_TCH1516:
    USA300HOU_1757 (ribH)
    VC40:
    SAVC_08045 (ribH)

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MNFEGKLIGKDLKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPL
    N315            MNFEGKLIGKDLKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPL
    NCTC8325        MNFEGKLIGKDLKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPL
    Newman          MNFEGKLIGKDLKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPL
    USA300_FPR3757  MNFEGKLIGKDLKVAIVVSRFNDFITGRLLEGAKDTLIRHDVNEDNIDVAFVPGAFEIPL
                    ************************************************************

    COL             VAKKLASSGNYDAVITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESI
    N315            VAKKLASSGNYDAIITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESI
    NCTC8325        VAKKLASSGNYDAVITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESI
    Newman          VAKKLASSGNYDAVITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESI
    USA300_FPR3757  VAKKLASSGNYDAVITLGCVIRGATSHYDYVCNEVAKGVSKVNDQTNVPVIFGILTTESI
                    *************:**********************************************

    COL             EQAVERAGTKAGNKGAEAAVSAIEMANLLKSIKA
    N315            EQAVERAGTKAGNKGAEAAVSAIEMANLLKSIKA
    NCTC8325        EQAVERAGTKAGNKGAEAAVSAIEMANLLKSIKA
    Newman          EQAVERAGTKAGNKGAEAAVSAIEMANLLKSIKA
    USA300_FPR3757  EQAVERAGTKAGNKGAEAAVSAIEMANLLKSIKA
                    **********************************