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Summary[edit source | edit]

  • pan ID?: SAUPAN004756000
  • symbol?: hemY
  • description?: protoporphyrinogen oxidase

      descriptions from strain specific annotations:

    • protoporphyrinogen oxidase
    • Protoporphyrinogen IX oxidase, aerobic
    • protoporphyrinogen IX dehydrogenase
    • putative protoporphyrinogen oxidase
  • strand?: -
  • coordinates?: 4970377..4971624
  • synteny block?: BlockID0036880
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1887 (hemG)
    N315:
    SA1650 (hemY)
    NCTC8325:
    Newman:
    NWMN_1723 (hemY)
    USA300_FPR3757:
    04-02981:
    SA2981_1788 (hemY)
    08BA02176:
    C248_1873 (hemY)
    11819-97:
    MS7_1837 (hemG)
    71193:
    ST398NM01_1897
    ECT-R 2:
    ECTR2_1674 (hemG)
    ED133:
    SAOV_1827 (hemY)
    ED98:
    SAAV_1850 (hemG)
    HO 5096 0412:
    SAEMRSA15_17360 (hemY)
    JH1:
    SaurJH1_1919
    JH9:
    SaurJH9_1885
    JKD6008:
    SAA6008_01789 (hemY)
    JKD6159:
    SAA6159_01760 (hemY)
    LGA251:
    SARLGA251_17150 (hemY)
    M013:
    M013TW_1838
    MRSA252:
    SAR1923 (hemY)
    MSHR1132:
    SAMSHR1132_16780
    MSSA476:
    SAS1753
    Mu3:
    SAHV_1817 (hemY)
    Mu50:
    SAV1832 (hemY)
    MW2:
    MW1772 (hemY)
    RF122:
    SAB1763c (hemY)
    ST398:
    SAPIG1897 (hemG)
    T0131:
    SAT0131_01951
    TCH60:
    HMPREF0772_11313 (hemG)
    TW20:
    SATW20_18260 (hemY)
    USA300_TCH1516:
    USA300HOU_1823 (hemG)
    VC40:
    SAVC_08390

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MTKSVAIIGAGITGLSSAYFLKQQDPNIDVTIFEASNRPGGKIQSYRKDGYMIELGPESY
    N315            MTKSVAIIGAGITGLSSAYFLKQQDPNIDVTIFEASNRPGGKIQSYRKDGYMIELGPESY
    NCTC8325        MTKSVAIIGAGITGLSSAYFLKQQDPNIDVTIFEASNRPGGKIQSYRKDGYMIELGPESY
    Newman          MTKSVAIIGAGITGLSSAYFLKQQDPNIDVTIFEASNRPGGKIQSYRKDGYMIELGPESY
    USA300_FPR3757  MTKSVAIIGAGITGLSSAYFLKQQDPNIDVTIFEASNRPGGKIQSYRKDGYMIELGPESY
                    ************************************************************

    COL             LGRKTIMTELAKDIGLEQDIVTNTTGQSYIFAKNKLYPIPGGSIMGIPTDIKPFVTTKLI
    N315            LGRKTIMTELAKDIGLEQDIVTNTTGQSYIFAKNKLYPIPGGSIMGIPTDIKPFVTTKLI
    NCTC8325        LGRKTIMTELAKDIGLEQDIVTNTTGQSYIFAKNKLYPIPGGSIMGIPTDIKPFVTTKLI
    Newman          LGRKTIMTELAKDIGLEQDIVTNTTGQSYIFAKNKLYPIPGGSIMGIPTDIKPFVTTKLI
    USA300_FPR3757  LGRKTIMTELAKDIGLEQDIVTNTTGQSYIFAKNKLYPIPGGSIMGIPTDIKPFVTTKLI
                    ************************************************************

    COL             SPLGKLRAGFDLLKKPTQMQDGDISVGAFFRARLGNEVLENLIEPLMGGIYGTDIDKLSL
    N315            SPLGKLRAGLDLIKKPIQMQDGDISVGAFFRARLGNEVLENLIEPLMGGIYGTDIDKLSL
    NCTC8325        SPLGKLRAGFDLLKKPTQMQDGDISVGAFFRARLGNEVLENLIEPLMGGIYGTDIDKLSL
    Newman          SPLGKLRAGFDLLKKPTQMQDGDISVGAFFRARLGNEVLENLIEPLMGGIYGTDIDKLSL
    USA300_FPR3757  SPLGKLRAGFDLLKKPTQMQDGDISVGAFFRARLGNEVLENLIEPLMGGIYGTDIDKLSL
                    *********:**:*** *******************************************

    COL             MSTFPNFKEKEEAFGSLIKGMKDEKNKRLKQRQLYPGAPKGQFKQFKHGLSSFIEALEQD
    N315            MSTFPNFKEKEEAFGSLIKGMKDEKNKRLKQRQLYPGAPKGQFKQFKHGLSSFIEALEQD
    NCTC8325        MSTFPNFKEKEEAFGSLIKGMKDEKNKRLKQRQLYPGAPKGQFKQFKHGLSSFIEALEQD
    Newman          MSTFPNFKEKEEAFGSLIKGMKDEKNKRLKQRQLYPGAPKGQFKQFKHGLSSFIEALEQD
    USA300_FPR3757  MSTFPNFKEKEEAFGSLIKGMKDEKNKRLKQRQLYPGAPKGQFKQFKHGLSSFIEALEQD
                    ************************************************************

    COL             VKNKGVTIRYNTSVDDIITSQKQYKIVYNDQLEEVYDGVLVTTPHQVFLNWFGQDPAFDY
    N315            VKNKGVTIRYNTSVDDIITSQKQYKIVYSNQQEDVFDGVLVTTPHQVFLNWFGQDPAFDY
    NCTC8325        VKNKGVTIRYNTSVDDIITSQKQYKIVYNDQLEEVYDGVLVTTPHQVFLNWFGQDPAFDY
    Newman          VKNKGVTIRYNTSVDDIITSQKQYKIVYNDQLEEVYDGVLVTTPHQVFLNWFGQDPAFDY
    USA300_FPR3757  VKNKGVTIRYNTSVDDIITSQKQYKIVYNDQLEEVYDGVLVTTPHQVFLNWFGQDPAFDY
                    ****************************.:* *:*:************************

    COL             FKTMDSTTVATVVLAFDEKDIENTHDGTGFVIARTSDTDITACTWTSKKWPFTTPEGKVL
    N315            FKTMDSTTVATVVLAFDEKDIENTYDGTGFVIARTSDTDITACTWTSKKWPFTTPEGKVL
    NCTC8325        FKTMDSTTVATVVLAFDEKDIENTHDGTGFVIARTSDTDITACTWTSKKWPFTTPEGKVL
    Newman          FKTMDSTTVATVVLAFDEKDIENTHDGTGFVIARTSDTDITACTWTSKKWPFTTPEGKVL
    USA300_FPR3757  FKTMDSTTVATVVLAFDEKDIENTHDGTGFVIARTSDTDITACTWTSKKWPFTTPEGKVL
                    ************************:***********************************

    COL             IRAYVGKPGDTVVDDHTDNELVSIVRRDLSQMMTFKGDPEFTIVNRLPKSMPQYHVGHIQ
    N315            IRAYVGKPGDTVVDDHTDNELVSIVRRDLSQMMTFKGDPEFTIVNRLPKSMPQYHVGHIQ
    NCTC8325        IRAYVGKPGDTVVDDHTDNELVSIVRRDLSQMMTFKGDPEFTIVNRLPKSMPQYHVGHIQ
    Newman          IRAYVGKPGDTVVDDHTDNELVSIVRRDLSQMMTFKGDPEFTIVNRLPKSMPQYHVGHIQ
    USA300_FPR3757  IRAYVGKPGDTVVDDHTDNELVSIVRRDLSQMMTFKGDPEFTIVNRLPKSMPQYHVGHIQ
                    ************************************************************

    COL             QIRQIQAHIKQTYPRLRVTGASFEAVGLPDCITQGKVAAEEVIAEL
    N315            QIRQIQAHIKQTYPRLRVTGASFEAVGLPDCITQGKVAAEEVIAEL
    NCTC8325        QIRQIQAHIKQTYPRLRVTGASFEAVGLPDCITQGKVAAEEVIAEL
    Newman          QIRQIQAHIKQTYPRLRVTGASFEALGLPDCITQSKVAAEEVIAEL
    USA300_FPR3757  QIRQIQAHIKQTYPRLRVTGASFEAVGLPDCITQGKVAAEEVIAEL
                    *************************:********.***********