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Summary[edit source | edit]

  • pan ID?: SAUPAN004844000
  • symbol?: gsaB
  • description?: glutamate-1-semialdehyde aminotransferase

      descriptions from strain specific annotations:

    • glutamate-1-semialdehyde aminotransferase
    • glutamate-1-semialdehyde-2,1-aminomutase
    • putative glutamate-1-semialdehyde 2,1-aminomutase
    • Glutamate-1-semialdehyde 2,1-aminomutase 2
  • strand?: +
  • coordinates?: 5051141..5052430
  • synteny block?: BlockID0037740
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1922 (hemL2)
    N315:
    SA1681 (gsaB)
    NCTC8325:
    Newman:
    NWMN_1756 (hemL)
    USA300_FPR3757:
    04-02981:
    SA2981_1820 (gsaB)
    08BA02176:
    C248_1935
    11819-97:
    MS7_1899
    71193:
    ST398NM01_1957
    ECT-R 2:
    ECTR2_1735 (hemL)
    ED133:
    SAOV_1891
    ED98:
    SAAV_1914 (hemL2)
    HO 5096 0412:
    SAEMRSA15_17710
    JH1:
    SaurJH1_1952
    JH9:
    SaurJH9_1918
    JKD6008:
    SAA6008_01821 (gsaB)
    JKD6159:
    SAA6159_01795 (gsaB)
    LGA251:
    SARLGA251_17460
    M013:
    M013TW_1898
    MRSA252:
    SAR1954
    MSHR1132:
    SAMSHR1132_17090
    MSSA476:
    SAS1786
    Mu3:
    SAHV_1849 (gsaB)
    Mu50:
    SAV1864 (gsaB)
    MW2:
    MW1804 (gsaB)
    RF122:
    SAB1797
    ST398:
    SAPIG1957 (hemL)
    T0131:
    SAT0131_01986
    TCH60:
    HMPREF0772_11280 (hemL)
    TW20:
    SATW20_18580
    USA300_TCH1516:
    USA300HOU_1859 (hemL2)
    VC40:
    SAVC_08575

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MNFSESERLQQLSNEYILGGVNSPSRSYKAVGGGAPVVMKEGHGAYLYDVDGNKFIDYLQ
    N315            MNFSESERLQQLSNEYILGGVNSPSRSYKAVGGGAPVVMKEGHGAYLYDVDGNKFIDYLQ
    NCTC8325        MNFSESERLQQLSNEYILGGVNSPSRSYKAVGGGAPVVMKEGHGAYLYDVDGNKFIDYLQ
    Newman          MNFSESERLQQLSNEYILGGVNSPSRSYKAVGGGAPVVMKEGHGAYLYDVDGNKFIDYLQ
    USA300_FPR3757  MNFSESERLQQLSNEYILGGVNSPSRSYKAVGGGAPVVMKEGHGAYLYDVDGNKFIDYLQ
                    ************************************************************

    COL             AYGPIITGHAHPHITKAIQEQAAKGVLFGTPTELEIEFSKKLRDAIPSLEKIRFVNSGTE
    N315            AYGPIIAGHAHPHITKAIQEQAAKGVLFGTPTELEIEFSKKLRDAIPSLEKIRFVNSGTE
    NCTC8325        AYGPIITGHAHPHITKAIQEQAAKGVLFGTPTELEIEFSKKLRDAIPSLEKIRFVNSGTE
    Newman          AYGPIITGHAHPHITKAIQEQAAKGVLFGTPTELEIEFSKKLRDAIPSLEKIRFVNSGTE
    USA300_FPR3757  AYGPIITGHAHPHITKAIQEQAAKGVLFGTPTELEIEFSKKLRDAIPSLEKIRFVNSGTE
                    ******:*****************************************************

    COL             AVMTTIRVARAYTKRNKIIKFAGSYHGHSDLVLVAAGSGPSQLGSPDSAGVPESVAREVI
    N315            AVMTTIRVARAYTKRNKIIKFAGSYHGHSDLVLVAAGSGPSQLGSPDSAGVPESVAREVI
    NCTC8325        AVMTTIRVARAYTKRNKIIKFAGSYHGHSDLVLVAAGSGPSQLGSPDSAGVPESVAREVI
    Newman          AVMTTIRVARAYTKRNKIIKFAGSYHGHSDLVLVAAGSGPSQLGSPDSAGVPESVAREVI
    USA300_FPR3757  AVMTTIRVARAYTKRNKIIKFAGSYHGHSDLVLVAAGSGPSQLGSPDSAGVPESVAREVI
                    ************************************************************

    COL             TVPFNDINAYKEAIEFWGDEIAAVLVEPIVGNFGMVMPQPGFLEEVNEISHNNGTLVIYD
    N315            TVPFNDINAYKEAIEFWGDEIAAVLVEPIVGNFGMVMPQPGFLEEVNEISHNNGTLVIYD
    NCTC8325        TVPFNDINAYKEAIEFWGDEIAAVLVEPIVGNFGMVMPQPGFLEEVNEISHNNGTLVIYD
    Newman          TVPFNDINAYKEAIEFWGDEIAAVLVEPIVGNFGMVMPQPGFLEEVNEISHNNGTLVIYD
    USA300_FPR3757  TVPFNDINAYKEAIEFWGDEIAAVLVEPIVGNFGMVMPQPGFLEEVNEISHNNGTLVIYD
                    ************************************************************

    COL             EVITAFRFHYGAAQDLLGVIPDLTAFGKIVGGGLPIGGYGGRQDIMEQVAPLGPAYQAGT
    N315            EVITAFRFHYGAAQDLLGVIPDLTAFGKIVGGGLPIGGYGGRQDIMEQVAPLGPAYQAGT
    NCTC8325        EVITAFRFHYGAAQDLLGVIPDLTAFGKIVGGGLPIGGYGGRQDIMEQVAPLGPAYQAGT
    Newman          EVITAFRFHYGAAQDLLGVIPDLTAFGKIVGGGLPIGGYGGRQDIMEQVAPLGPAYQAGT
    USA300_FPR3757  EVITAFRFHYGAAQDLLGVIPDLTAFGKIVGGGLPIGGYGGRQDIMEQVAPLGPAYQAGT
                    ************************************************************

    COL             MAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTL
    N315            MAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTL
    NCTC8325        MAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTL
    Newman          MAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTL
    USA300_FPR3757  MAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTL
                    ************************************************************

    COL             YFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQGINLAPSKFEAWFLTTEHTEEDIKQTLKA
    N315            YFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQGINLAPSKFEAWFLTTEHTEEDIQQTLKA
    NCTC8325        YFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQGINLAPSKFEAWFLTTEHTEEDIKQTLKA
    Newman          YFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQGINLAPSKFEAWFLTTEHTEEDIKQTLKA
    USA300_FPR3757  YFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQGINLAPSKFEAWFLTTEHTEEDIKQTLKA
                    ******************************************************:*****

    COL             ADYAFSQMK
    N315            ADYAFSQMK
    NCTC8325        ADYAFSQMK
    Newman          ADYAFSQMK
    USA300_FPR3757  ADYAFSQMK
                    *********