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Summary[edit source | edit]

  • pan ID?: SAUPAN004857000
  • symbol?: sgtB
  • description?: glycosyltransferase

      descriptions from strain specific annotations:

    • glycosyltransferase
    • putative transglycosylase
    • Monofunctional glycosyltransferase
    • Monofunctional biosynthetic peptidoglycan transglycosylase
    • monofunctional glycosyltransferase (MGT) (PeptidoglycanTGase)
  • strand?: -
  • coordinates?: 5063504..5064313
  • synteny block?: BlockID0037870
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    SA1691 (sgtB)
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1830
    08BA02176:
    C248_1946
    11819-97:
    MS7_1909 (mgt)
    71193:
    ST398NM01_1967
    ECT-R 2:
    ECTR2_1745
    ED133:
    SAOV_1900
    ED98:
    SAAV_1924
    HO 5096 0412:
    SAEMRSA15_17810
    JH1:
    SaurJH1_1962
    JH9:
    SaurJH9_1928
    JKD6008:
    SAA6008_01831 (sgtB)
    JKD6159:
    SAA6159_01805 (sgtB)
    LGA251:
    SARLGA251_17560
    M013:
    M013TW_1910
    MRSA252:
    SAR1964
    MSHR1132:
    SAMSHR1132_17190
    MSSA476:
    SAS1796
    Mu3:
    SAHV_1859 (sgtB)
    Mu50:
    SAV1874
    MW2:
    MW1814 (sgtB)
    RF122:
    SAB1806c
    ST398:
    SAPIG1967
    T0131:
    SAT0131_01997
    TCH60:
    HMPREF0772_11270
    TW20:
    SATW20_18680
    USA300_TCH1516:
    USA300HOU_1869
    VC40:
    SAVC_08625

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MKRSDRYSNSNEHFEHMKHEPHYNTYYQPVGKPPKKKKSKRILLKILLTILIIIALFIGI
    N315            MKRSDRYSNSNEHFEHMKHEPHYNTYYQPVGKPPKKKKSKRILLKILLTILIIIALFIGI
    NCTC8325        MKRSDRYSNSNEHFEHMKHEPHYNTYYQPVGKPPKKKKSKRILLKILLTILIIIALFIGI
    Newman          MKRSDRYSNSNEHFEHMKHEPHYNTYYQPVGKPPKKKKSKRILLKILLTILIIIALFIGI
    USA300_FPR3757  MKRSDRYSNSNEHFEHMKHEPHYNTYYQPVGKPPKKKKSKRILLKILLTILIIIALFIGI
                    ************************************************************

    COL             MYFLSTRDNVDELRKIENKSSFVSADNMPEYVKGAFISMEDERFYNHHGFDLKGTTRALF
    N315            MYFLSTRDNVDELRKIENKSSFVSADNMPEYVKGAFISMEDERFYNHHGFDLKGTTRALF
    NCTC8325        MYFLSTRDNVDELRKIENKSSFVSADNMPEYVKGAFISMEDERFYNHHGFDLKGTTRALF
    Newman          MYFLSTRDNVDELRKIENKSSFVSADNMPEYVKGAFISMEDERFYNHHGFDLKGTTRALF
    USA300_FPR3757  MYFLSTRDNVDELRKIENKSSFVSADNMPEYVKGAFISMEDERFYNHHGFDLKGTTRALF
                    ************************************************************

    COL             STISDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVAHRVEKQYNKNEILSFYLNNI
    N315            STISDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVAHRVEKQYNKNEILSFYLNNI
    NCTC8325        STISDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVAHRVEKQYNKNEILSFYLNNI
    Newman          STISDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVAHRVEKQYNKNEILSFYLNNI
    USA300_FPR3757  STISDRDVQGGSTITQQVVKNYFYDNDRSFTRKVKELFVAHRVEKQYNKNEILSFYLNNI
                    ************************************************************

    COL             YFGDNQYTLEGAANHYFGTTVNKNSTTMSHITVLQSAILASKVNAPSVYNINNMSENFTQ
    N315            YFGDNQYTLEGAANHYFGTTVNKNSTTMSHITVLQSAILASKVNAPSVYNINNMSENFTQ
    NCTC8325        YFGDNQYTLEGAANHYFGTTVNKNSTTMSHITVLQSAILASKVNAPSVYNINNMSENFTQ
    Newman          YFGDNQYTLEGAANHYFGTTVNKNSTTMSHITVLQSAILASKVNAPSVYNINNMSENFTQ
    USA300_FPR3757  YFGDNQYTLEGAANHYFGTTVNKNSTTMSHITVLQSAILASKVNAPSVYNINNMSENFTQ
                    ************************************************************

    COL             RVSTNLEKMKQQNYINETQYQQAMSQLNR
    N315            RVSTNLEKMKQQNYINETQYQQAMSQLNR
    NCTC8325        RVSTNLEKMKQQNYINETQYQQAMSQLNR
    Newman          RVSTNLEKMKQQNYINETQYQQAMSQLNR
    USA300_FPR3757  RVSTNLEKMKQQNYINETQYQQAMSQLNR
                    *****************************