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Pangenome04-0298108BA0217611819-9771193COLECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50N315NCTC8325NewmanRF122ST398T0131TCH60TW20USA300_FPR3757USA300_TCH1516VC40

Summary[edit source | edit]

  • pan ID?: SAUPAN005277000
  • symbol?: agrC
  • description?: pseudogene

      descriptions from strain specific annotations:

    • pseudogene
    • accessory gene regulator C
    • Histidine kinase of the competence regulon ComD
  • strand?: +
  • coordinates?: 5443472..5446662
  • synteny block?: BlockID0040780
  • occurrence?: in 25% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    SA1843 (agrC)
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1979 (agrC)
    08BA02176:
    11819-97:
    71193:
    ECT-R 2:
    ECTR2_1889
    ED133:
    ED98:
    SAAV_2086 (agrC)
    HO 5096 0412:
    JH1:
    SaurJH1_2111
    JH9:
    SaurJH9_2075
    JKD6008:
    JKD6159:
    LGA251:
    M013:
    MRSA252:
    MSHR1132:
    MSSA476:
    Mu3:
    SAHV_2023 (agrC)
    Mu50:
    SAV2038 (agrC)
    MW2:
    RF122:
    ST398:
    T0131:
    TCH60:
    TW20:
    USA300_TCH1516:
    VC40:

Genome Viewer[edit source | edit]

Alignments[edit source | edit]

  • alignment of orthologues: