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Summary[edit source | edit]

  • pan ID?: SAUPAN005364000
  • symbol?: cls2
  • description?: cardiolipin synthetase

      descriptions from strain specific annotations:

    • cardiolipin synthetase
    • phospholipase D/transphosphatidylase
    • putative cardiolipin synthetase
    • Cardiolipin synthase 2
    • cardiolipin synthase
    • cardiolipin synthetase (Cardiolipin synthase) (CLsynthase)
    • Cardiolipin synthetase 2
  • strand?: +
  • coordinates?: 5538678..5540238
  • synteny block?: BlockID0041610
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL2079 (cls2)
    N315:
    NCTC8325:
    Newman:
    NWMN_1992 (cls)
    USA300_FPR3757:
    04-02981:
    SA2981_2029
    08BA02176:
    C248_2099
    11819-97:
    MS7_2104
    71193:
    ST398NM01_2129
    ECT-R 2:
    ECTR2_1944
    ED133:
    SAOV_2129
    ED98:
    SAAV_2142 (cls2)
    HO 5096 0412:
    SAEMRSA15_19970
    JH1:
    SaurJH1_2163
    JH9:
    SaurJH9_2125
    JKD6008:
    SAA6008_02126 (cls2)
    JKD6159:
    SAA6159_02002 (cls2)
    LGA251:
    SARLGA251_18900
    M013:
    M013TW_2046
    MRSA252:
    SAR2177
    MSHR1132:
    SAMSHR1132_19120
    MSSA476:
    SAS1992
    Mu3:
    SAHV_2073
    Mu50:
    SAV2088
    MW2:
    MW2011
    RF122:
    SAB1972
    ST398:
    SAPIG2129
    T0131:
    SAT0131_02246
    TCH60:
    HMPREF0772_11105 (cls)
    TW20:
    SATW20_22270
    USA300_TCH1516:
    USA300HOU_2083 (cls2)
    VC40:
    SAVC_09320

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             -------------------------MIELLSIALKHSNIILNSIFIGAFILNLLFAFTII
    N315            -------------------------MIELLSIALKHSNIILNSIFIGAFILNLLFAFTII
    NCTC8325        -------------------------MIELLSIALKHSNIILNSIFIGAFILNLLFAFTII
    Newman          -------------------------MIELLSIALKHSNIILNSIFIGAFILNLLFAFTII
    USA300_FPR3757  MIFKLLHDTINKIYYSFKIFDGRFQMIELLSIALKHSNIILNSIFIGAFILNLLFAFTII
                                             ***********************************

    COL             FMERRSANSIWAWLLVLVFLPLFGFILYLLLGRQIQRDQIFKIDKEDKKGLELIVDEQLA
    N315            FMERRSANSIWAWLLVLVFLPLFGFILYLLLGRQIQRDQIFKIDKEDKKGLELIVDEQLA
    NCTC8325        FMERRSANSIWAWLLVLVFLPLFGFILYLLLGRQIQRDQIFKIDKEDKKGLELIVDEQLA
    Newman          FMERRSANSIWAWLLVLVFLPLFGFILYLLLGRQIQRDQIFKIDKEDKKGLELIVDEQLA
    USA300_FPR3757  FMERRSANSIWAWLLVLVFLPLFGFILYLLLGRQIQRDQIFKIDKEDKKGLELIVDEQLA
                    ************************************************************

    COL             ALKNENFSNSNYQIVKFKEMIQMLLYNNAAFLTTDNDLKIYTDGQEKFDDLIQDIRNATD
    N315            ALKNENFSNSNYQIVKFKEMIQMLLYNNAAFLTTDNDLKIYTDGQEKFDDLIQDIRNATD
    NCTC8325        ALKNENFSNSNYQIVKFKEMIQMLLYNNAAFLTTDNDLKIYTDGQEKFDDLIQDIRNATD
    Newman          ALKNENFSNSNYQIVKFKEMIQMLLYNNAAFLTTDNDLKIYTDGQEKFDDLIQDIRNATD
    USA300_FPR3757  ALKNENFSNSNYQIVKFKEMIQMLLYNNAAFLTTDNDLKIYTDGQEKFDDLIQDIRNATD
                    ************************************************************

    COL             YIHFQYYIIQNDELGRTILNELGKKAEQGVEVKILYDDMGSRGLRKKGLRPFRNKGGHAE
    N315            YIHFQYYIIQNDELGRTILNELGKKAEQGVEVKILYDDMGSRGLRKKGLRPFRNKGGHAE
    NCTC8325        YIHFQYYIIQNDELGRTILNELGKKAEQGVEVKILYDDMGSRGLRKKGLRPFRNKGGHAE
    Newman          YIHFQYYIIQNDELGRTILNELGKKAEQGVEVKILYDDMGSRGLRKKGLRPFRNKGGHAE
    USA300_FPR3757  YIHFQYYIIQNDELGRTILNELGKKAEQGVEVKILYDDMGSRGLRKKGLRPFRNKGGHAE
                    ************************************************************

    COL             AFFPSKLPLINLRMNNRNHRKIVVIDGQIGYVGGFNVGDEYLGKSKKFGYWRDTHLRIVG
    N315            AFFPSKLPLINLRMNNRNHRKIVVIDGQIGYVGGFNVGDEYLGKSKKFGYWRDTHLRIVG
    NCTC8325        AFFPSKLPLINLRMNNRNHRKIVVIDGQIGYVGGFNVGDEYLGKSKKFGYWRDTHLRIVG
    Newman          AFFPSKLPLINLRMNNRNHRKIVVIDGQIGYVGGFNVGDEYLGKSKKFGYWRDTHLRIVG
    USA300_FPR3757  AFFPSKLPLINLRMNNRNHRKIVVIDGQIGYVGGFNVGDEYLGKSKKFGYWRDTHLRIVG
                    ************************************************************

    COL             DAVNALQLRFILDWNSQATRDHISYDDRYFPDVNSGGTIGVQIASSGPDEEWEQIKYGYL
    N315            DAVNALQLRFILDWNSQATRDHISYDDRYFPDVNSGGTIGVQIASSGPDEEWEQIKYGYL
    NCTC8325        DAVNALQLRFILDWNSQATRDHISYDDRYFPDVNSGGTIGVQIASSGPDEEWEQIKYGYL
    Newman          DAVNALQLRFILDWNSQATRDHISYDDRYFPDVNSGGTIGVQIASSGPDEEWEQIKYGYL
    USA300_FPR3757  DAVNALQLRFILDWNSQATRDHISYDDRYFPDVNSGGTIGVQIASSGPDEEWEQIKYGYL
                    ************************************************************

    COL             KMISSAKKSIYIQSPYFIPDQAFLDSIKIAALGGVDVNIMIPNKPDHPFVFWATLKNAAS
    N315            KMISSAKKSIYIQSPYFIPDQAFLDSIKIAALGGVDVNIMIPNKPDHPFVFWATLKNAAS
    NCTC8325        KMISSAKKSIYIQSPYFIPDQAFLDSIKIAALGGVDVNIMIPNKPDHPFVFWATLKNAAS
    Newman          KMISSAKKSIYIQSPYFIPDQAFLDSIKIAALGGVDVNIMIPNKPDHPFVFWATLKNAAS
    USA300_FPR3757  KMISSAKKSIYIQSPYFIPDQAFLDSIKIAALGGVDVNIMIPNKPDHPFVFWATLKNAAS
                    ************************************************************

    COL             LLDAGVKVFHYDNGFLHSKTLVIDDEIASVGTANMDHRSFTLNFEVNAFIYDQQIAKKLK
    N315            LLDAGVKVFHYDNGFLHSKTLVIDDEIASVGTANMDHRSFTLNFEVNAFIYDQQIAKKLK
    NCTC8325        LLDAGVKVFHYDNGFLHSKTLVIDDEIASVGTANMDHRSFTLNFEVNAFIYDQQIAKKLK
    Newman          LLDAGVKVFHYDNGFLHSKTLVIDDEIASVGTANMDHRSFTLNFEVNAFIYDQQIAKKLK
    USA300_FPR3757  LLDAGVKVFHYDNGFLHSKTLVIDDEIASVGTANMDHRSFTLNFEVNAFIYDQQIAKKLK
                    ************************************************************

    COL             QAFIDDLAVSSELTKARYAKRSLWIKFKEGISQLLSPIL
    N315            QAFIDDLAVSSELTKARYAKRSLWIKFKEGISQLLSPIL
    NCTC8325        QAFIDDLAVSSELTKARYAKRSLWIKFKEGISQLLSPIL
    Newman          QAFIDDLAVSSELTKARYAKRSLWIKFKEGISQLLSPIL
    USA300_FPR3757  QAFIDDLAVSSELTKARYAKRSLWIKFKEGISQLLSPIL
                    ***************************************