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Summary[edit source | edit]

  • pan ID?: SAUPAN005585000
  • symbol?: lacG
  • description?: 6-phospho-beta-galactosidase
  • strand?: -
  • coordinates?: 5725805..5727217
  • synteny block?: BlockID0043450
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL2180 (lacG)
    N315:
    SA1991 (lacG)
    NCTC8325:
    Newman:
    NWMN_2093 (lacG)
    USA300_FPR3757:
    04-02981:
    SA2981_2127 (lacG)
    08BA02176:
    C248_2227 (lacG)
    11819-97:
    MS7_2212 (lacG)
    71193:
    ST398NM01_2249
    ECT-R 2:
    ECTR2_2050 (lacG)
    ED133:
    SAOV_2236c
    ED98:
    SAAV_2250 (lacG)
    HO 5096 0412:
    SAEMRSA15_20940 (lacG)
    JH1:
    SaurJH1_2259
    JH9:
    SaurJH9_2220
    JKD6008:
    SAA6008_02230 (lacG)
    JKD6159:
    SAA6159_02100 (lacG)
    LGA251:
    SARLGA251_19840 (lacG)
    M013:
    M013TW_2155
    MRSA252:
    SAR2280 (lacG)
    MSHR1132:
    SAMSHR1132_20210
    MSSA476:
    SAS2090
    Mu3:
    SAHV_2173 (lacG)
    Mu50:
    SAV2189 (lacG)
    MW2:
    MW2115 (lacG)
    RF122:
    SAB2070c (lacG)
    ST398:
    SAPIG2249 (lacG)
    T0131:
    SAT0131_02363 (atl)
    TCH60:
    HMPREF0772_11002 (lacG)
    TW20:
    SATW20_23270 (lacG)
    USA300_TCH1516:
    USA300HOU_2182 (lacG)
    VC40:
    SAVC_09835

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MTKTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWYTAEPASDFYDRYPVDL
    N315            MTKTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWYTAEPASDFYNRYPVDL
    NCTC8325        MTKTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWYTAEPASDFYNRYPVDL
    Newman          MTKTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWYTAEPASDFYNRYPVDL
    USA300_FPR3757  MTKTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWYTAEPASDFYNRYPVDL
                    *****************************************************:******

    COL             ELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP
    N315            ELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP
    NCTC8325        ELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP
    Newman          ELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP
    USA300_FPR3757  ELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTP
                    ************************************************************

    COL             EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPEVKYWTTFNEIGPIGDGQYLVGKFPPGIKY
    N315            EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPEVKYWTTFNEIGPIGDGQYLVGKFPPGIKY
    NCTC8325        EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPEVKYWTTFNEIGPIGDGQYLVGKFPPGIKY
    Newman          EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPEVKYWTTFNEIGPIGDGQYLVGKFPPGIKY
    USA300_FPR3757  EVLHKDGDFLNRKTIDYFVDYAEYCFKEFPEVKYWTTFNEIGPIGDGQYLVGKFPPGIKY
                    ************************************************************

    COL             DFEKVFQSHHNMMVAHARAVKLFKDGGYKGEIGVVHALPTKYPFDPSNPEDVRAAELEDI
    N315            DFEKVFQSHHNMMVAHARAVKLFKDGGYQGEIGVVHALPTKYPFDPSNPEDVRAAELEDI
    NCTC8325        DFEKVFQSHHNMMVAHARAVKLFKDGGYKGEIGVVHALPTKYPFDPSNPEDVRAAELEDI
    Newman          DFEKVFQSHHNMMVAHARAVKLFKDGGYKGEIGVVHALPTKYPFDPSNPEDVRAAELEDI
    USA300_FPR3757  DFEKVFQSHHNMMVAHARAVKLFKDGGYKGEIGVVHALPTKYPFDPSNPEDVRAAELEDI
                    ****************************:*******************************

    COL             IHNKFILDATYLGKYSRETMEGVQHILSVNGGKLNITDEDYAILDAAKDLNDFLGINYYM
    N315            IHNKFILDATYLGKYSRETMEGVQHILSVNGGKLNITDEDYAILDAAKDLNDFLGINYYM
    NCTC8325        IHNKFILDATYLGKYSRETMEGVQHILSVNGGKLNITDEDYAILDAAKDLNDFLGINYYM
    Newman          IHNKFILDATYLGKYSRETMEGVQHILSVNGGKLNITDEDYAILDAAKDLNDFLGINYYM
    USA300_FPR3757  IHNKFILDATYLGKYSRETMEGVQHILSVNGGKLNITDEDYAILDAAKDLNDFLGINYYM
                    ************************************************************

    COL             SDWMRGYDGESEITHNATGDKGGSKYQLKGVGQREFDVDVPRTDWDWMIYPQGLYDQIMR
    N315            SDWMRGYDGESEITHNATGDKGGSKYQLKGVGQREFDVDVPRTDWDWMIYPQGLYDQIMR
    NCTC8325        SDWMRGYDGESEITHNATGDKGGSKYQLKGVGQREFDVDVPRTDWDWMIYPQGLYDQIMR
    Newman          SDWMRGYDGESEITHNATGDKGGSKYQLKGVGQREFDVDVPRTDWDWMIYPQGLYDQIMR
    USA300_FPR3757  SDWMRGYDGESEITHNATGDKGGSKYQLKGVGQREFDVDVPRTDWDWMIYPQGLYDQIMR
                    ************************************************************

    COL             VVKDYPNYHKIYITENGLGYKDEFIESEKTVHDDARIDYVRQHLNVIADAIIDGANVKGY
    N315            VVKDYPNYHKIYITENGLGYKDEFIESEKTVHDDARIDYVRQHLNVIADAIKDGANVKGY
    NCTC8325        VVKDYPNYHKIYITENGLGYKDEFIESEKTVHDDARIDYVRQHLNVIADAIIDGANVKGY
    Newman          VVKDYPNYHKIYITENGLGYKDEFIESEKTVHDDARIDYVRQHLNVIADAIIDGANVKGY
    USA300_FPR3757  VVKDYPNYHKIYITENGLGYKDEFIESEKTVHDDARIDYVRQHLNVIADAIIDGANVKGY
                    *************************************************** ********

    COL             FIWSLMDVFSWSNGYEKRYGLFYVDFETQERYPKKSAYWYKELAETKEIK
    N315            FIWSLMDVFSWSNGYEKRYGLFYVDFETQERYPKKSAYWYKELAETKEIK
    NCTC8325        FIWSLMDVFSWSNGYEKRYGLFYVDFETQERYPKKSAYWYKELAETKEIK
    Newman          FIWSLMDVFSWSNGYEKRYGLFYVDFETQERYPKKSAYWYKELAETKEIK
    USA300_FPR3757  FIWSLMDVFSWSNGYEKRYGLFYVDFETQERYPKKSAYWYKELAETKEIK
                    **************************************************