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NCBI: 26-AUG-2013

Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA1991 [new locus tag: SA_RS11465 ]
  • pan locus tag?: SAUPAN005585000
  • symbol: lacG
  • pan gene symbol?: lacG
  • synonym:
  • product: 6-phospho-beta-galactosidase

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SA1991 [new locus tag: SA_RS11465 ]
  • symbol: lacG
  • product: 6-phospho-beta-galactosidase
  • replicon: chromosome
  • strand: -
  • coordinates: 2262657..2264069
  • length: 1413
  • essential: no DEG other strains

Accession numbers[edit | edit source]

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGACTAAAACATTACCTGAAGATTTTATTTTTGGTGGAGCAACAGCAGCATATCAAGCA
    GAAGGTGCGACAAATACAGATGGTAAAGGTCGTGTTGCATGGGATACGTATTTGGAAGAA
    AACTATTGGTACACTGCAGAACCAGCGAGTGATTTTTATAACAGATATCCAGTGGATTTA
    GAATTAAGTGAAAAATTCGGTGTTAATGGTATCCGTATTTCAATTGCATGGTCACGTATC
    TTCCCAAATGGATATGGCGAAGTTAACCCTAAAGGTGTTGAGTATTACCATAAGTTATTT
    GCAGAGTGTCATAAACGTCATGTTGAACCATTTGTAACATTGCATCATTTTGATACACCA
    GAAGTGTTACACAAAGATGGCGATTTTCTAAATCGTAAAACGATTGACTACTTTGTAGAT
    TATGCTGAATATTGTTTTAAAGAATTCCCAGAAGTAAAATATTGGACTACATTCAATGAA
    ATTGGACCTATTGGTGATGGTCAATATTTAGTAGGTAAATTCCCTCCAGGTATTAAATAT
    GATTTTGAAAAAGTTTTCCAATCACATCACAATATGATGGTTGCTCATGCAAGAGCAGTA
    AAATTATTTAAAGATGGCGGCTATCAAGGAGAAATTGGTGTTGTACACGCATTGCCAACA
    AAATATCCGTTCGATCCATCAAATCCTGAAGATGTTCGTGCAGCAGAATTAGAAGATATC
    ATCCATAATAAATTCATCTTAGATGCAACATATTTAGGTAAGTATTCTCGTGAAACGATG
    GAAGGTGTGCAACATATCTTATCTGTTAATGGCGGTAAATTAAATATTACAGATGAAGAT
    TATGCCATTTTAGATGCAGCCAAAGATTTAAACGACTTCTTAGGTATCAATTACTACATG
    AGTGACTGGATGAGAGGTTACGATGGAGAATCTGAAATCACGCATAATGCGACAGGTGAT
    AAAGGCGGTTCTAAATACCAACTTAAAGGTGTCGGACAACGTGAATTTGATGTCGACGTA
    CCTCGCACAGACTGGGACTGGATGATCTATCCTCAAGGTTTATATGATCAAATCATGCGT
    GTTGTTAAAGATTATCCTAACTATCACAAGATTTATATCACTGAAAATGGTTTAGGATAT
    AAAGATGAATTTATTGAATCTGAAAAAACAGTTCATGATGATGCACGTATTGATTATGTA
    AGACAACATTTGAACGTTATTGCAGATGCTATTAAAGATGGTGCAAATGTTAAAGGTTAC
    TTTATTTGGTCATTAATGGATGTGTTCTCTTGGTCAAATGGTTATGAAAAACGATATGGT
    TTATTCTATGTCGATTTTGAGACTCAAGAACGTTATCCTAAGAAAAGTGCTTATTGGTAC
    AAAGAGTTAGCCGAAACAAAAGAAATTAAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1413

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SA1991 [new locus tag: SA_RS11465 ]
  • symbol: LacG
  • description: 6-phospho-beta-galactosidase
  • length: 470
  • theoretical pI: 4.91432
  • theoretical MW: 54564.6
  • GRAVY: -0.594468

Function[edit | edit source]

  • reaction:
    EC 3.2.1.85?  ExPASy
    6-phospho-beta-galactosidase A 6-phospho-beta-D-galactoside + H2O = 6-phospho-D-galactose + an alcohol
  • TIGRFAM:
    Metabolism Energy metabolism Biosynthesis and degradation of polysaccharides 6-phospho-beta-galactosidase (TIGR01233; EC 3.2.1.85; HMM-score: 865.6)
    and 1 more
    beta-galactosidase (TIGR03356; HMM-score: 391.7)
  • TheSEED  :
    • 6-phospho-beta-galactosidase (EC 3.2.1.85)
    Carbohydrates Di- and oligosaccharides Lactose and Galactose Uptake and Utilization  6-phospho-beta-galactosidase (EC 3.2.1.85)
  • PFAM:
    Glyco_hydro_tim (CL0058) Glyco_hydro_1; Glycosyl hydrolase family 1 (PF00232; HMM-score: 585.9)
    and 1 more
    C2 (CL0154) IcmF_C; Type VI secretion protein IcmF C-terminal (PF06744; HMM-score: 12.6)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 9.97
    • Cytoplasmic Membrane Score: 0
    • Cellwall Score: 0.01
    • Extracellular Score: 0.02
    • Internal Helices: 0
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular possibility: 1
    • Signal peptide possibility: -1
    • N-terminally Anchored Score: -1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.093604
    • TAT(Tat/SPI): 0.025265
    • LIPO(Sec/SPII): 0.018078
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

  • MTKTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWYTAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKDGDFLNRKTIDYFVDYAEYCFKEFPEVKYWTTFNEIGPIGDGQYLVGKFPPGIKYDFEKVFQSHHNMMVAHARAVKLFKDGGYQGEIGVVHALPTKYPFDPSNPEDVRAAELEDIIHNKFILDATYLGKYSRETMEGVQHILSVNGGKLNITDEDYAILDAAKDLNDFLGINYYMSDWMRGYDGESEITHNATGDKGGSKYQLKGVGQREFDVDVPRTDWDWMIYPQGLYDQIMRVVKDYPNYHKIYITENGLGYKDEFIESEKTVHDDARIDYVRQHLNVIADAIKDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFETQERYPKKSAYWYKELAETKEIK

Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator: LacR (repression) regulon
    LacR(TF)important in Lactose utilization; RegPrecise 

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]