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Summary[edit source | edit]

  • pan ID?: SAUPAN005769000
  • symbol?: nhaC
  • description?: Na+/H+ antiporter NhaC

      descriptions from strain specific annotations:

    • Na+/H+ antiporter NhaC
    • Na_ antiporter
    • NhaC family Na(+)/H(+) antiporter
    • putative Na+/H+ antiporter
  • strand?: -
  • coordinates?: 5859600..5860793
  • synteny block?: BlockID0045150
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL2292 (nhaC)
    N315:
    NCTC8325:
    Newman:
    NWMN_2200 (nhaC)
    USA300_FPR3757:
    04-02981:
    SA2981_2239 (nhaC)
    08BA02176:
    C248_2340
    11819-97:
    MS7_2318 (nhaC)
    71193:
    ST398NM01_2351
    ECT-R 2:
    ECTR2_2160 (nhaC)
    ED133:
    SAOV_2340c
    ED98:
    SAAV_2362 (nhaC)
    HO 5096 0412:
    SAEMRSA15_21980
    JH1:
    SaurJH1_2367
    JH9:
    SaurJH9_2324
    JKD6008:
    SAA6008_02336 (nhaC)
    JKD6159:
    SAA6159_02204
    LGA251:
    SARLGA251_20830
    M013:
    M013TW_2257
    MRSA252:
    SAR2385
    MSHR1132:
    SAMSHR1132_21250
    MSSA476:
    SAS2191
    Mu3:
    SAHV_2285
    Mu50:
    SAV2301
    MW2:
    MW2219
    RF122:
    SAB2173c
    ST398:
    SAPIG2351 (nhaC)
    T0131:
    SAT0131_02479
    TCH60:
    HMPREF0772_10897 (nhaC)
    TW20:
    SATW20_24310
    USA300_TCH1516:
    USA300HOU_2282 (nhaC)
    VC40:
    SAVC_10360

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MMKRKPTFLESISTMIVMVIVVVTGFVFFDIPIQVLLIIASAYATWIAKRVGLTWQDLEK
    N315            MMKRKPTFLESISTMIVMVIVVVTGFVFFDIPIQVLLIIASAYATWIAKRVGLTWQDLEK
    NCTC8325        MMKRKPTFLESISTMIVMVIVVVTGFVFFDIPIQVLLIIASAYATWIAKRVGLTWQDLEK
    Newman          MMKRKPTFLESISTMIVMVIVVVTGFVFFDIPIQVLLIIASAYATWIAKRVGLTWQDLEK
    USA300_FPR3757  MMKRKPTFLESISTMIVMVIVVVTGFVFFDIPIQVLLIIASAYATWIAKRVGLTWQDLEK
                    ************************************************************

    COL             GIAERLNTAMPAILIILAVGIIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTS
    N315            GIAERLNTAMPAILIILAVGIIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTS
    NCTC8325        GIAERLNTAMPAILIILAVGIIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTS
    Newman          GIAERLNTAMPAILIILAVGIIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTS
    USA300_FPR3757  GIAERLNTAMPAILIILAVGIIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTS
                    ************************************************************

    COL             VATGTAWGSASTAGIALISIGNQLGIPPGMAAGAIIAGAVFGDKMSPLSDTTNLAALVTK
    N315            VATGTAWGSASTAGIALISIGNQLGIPPGMAAGAIIAGAVFGDKMSPLSDTTNLAALVTK
    NCTC8325        VATGTAWGSASTAGIALISIGNQLGIPPGMAAGAIIAGAVFGDKMSPLSDTTNLAALVTK
    Newman          VATGTAWGSASTAGIALISIGNQLGIPPGMAAGAIIAGAVFGDKMSPLSDTTNLAALVTK
    USA300_FPR3757  VATGTAWGSASTAGIALISIGNQLGIPPGMAAGAIIAGAVFGDKMSPLSDTTNLAALVTK
                    ************************************************************

    COL             VNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELAQIYQINIWVWV
    N315            VNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELAQIYQINIWVWV
    NCTC8325        VNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELAQIYQINIWVWV
    Newman          VNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELAQIYQINIWVWV
    USA300_FPR3757  VNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELAQIYQINIWVWV
                    ************************************************************

    COL             PLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHFKMTDGFKATFSGFNESMIHQSHIS
    N315            PLIVIIVCLLFKMATVPAMVISSFSAIIVGTFNHHFKMTDGFKATFSGFNDSMIHQSHIS
    NCTC8325        PLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHFKMTDGFKATFSGFNESMIHQSHIS
    Newman          PLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHFKMTDGFKATFSGFNESMIHQSHIS
    USA300_FPR3757  PLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHFKMTDGFKATFSGFNESMIHQSHIS
                    *******************:******************************:*********

    COL             SSVKSLLEQGGMMSMTQILVTIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITV
    N315            SSVKSLLEQGGMMSMTQILVTIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITV
    NCTC8325        SSVKSLLEQGGMMSMTQILVTIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITV
    Newman          SSVKSLLEQGGMMSMTQILVTIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITV
    USA300_FPR3757  SSVKSLLEQGGMMSMTQILVTIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITV
                    ************************************************************

    COL             ICCIALVFAAGVASIVIIMVGVLMKDLFEKYQVSRSVLSRTLEDSSTMVLPLIPWGTSGI
    N315            ICCIALVFAAGVASIVIIMVGVLMKDLFEKYQVSRSVLSRTLEDSSTMVLPLIPWGTSGI
    NCTC8325        ICCIALVFAAGVASIVIIMVGVLMKDLFEKYQVSRSVLSRTLEDSSTMVLPLIPWGTSGI
    Newman          ICCIALVFAAGVASIVIIMVGVLMKDLFEKYQVSRSVLSRTLEDSSTMVLPLIPWGTSGI
    USA300_FPR3757  ICCIALVFAAGVASIVIIMVGVLMKDLFEKYQVSRSVLSRTLEDSSTMVLPLIPWGTSGI
                    ************************************************************

    COL             YYTNQLHVSVEEFFIWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT
    N315            YYTNQLHVSVGEFFMWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT
    NCTC8325        YYTNQLHVSVEEFFIWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT
    Newman          YYTNQLHVSVEEFFIWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT
    USA300_FPR3757  YYTNQLHVSVEEFFIWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT
                    ********** ***:*******************************