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Summary[edit source | edit]

  • pan ID?: SAUPAN005818000
  • symbol?: hutU
  • description?: urocanate hydratase
  • strand?: -
  • coordinates?: 5902291..5903952
  • synteny block?: BlockID0045630
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL2324 (hutU)
    N315:
    SA2122 (hutU)
    NCTC8325:
    Newman:
    NWMN_2232 (hutU)
    USA300_FPR3757:
    04-02981:
    SA2981_2270 (hutU)
    08BA02176:
    C248_2374 (hutU)
    11819-97:
    MS7_2349 (hutU)
    71193:
    ST398NM01_2383
    ECT-R 2:
    ECTR2_2191 (hutU)
    ED133:
    SAOV_2371c
    ED98:
    SAAV_2395 (hutU)
    HO 5096 0412:
    SAEMRSA15_22290 (hutU)
    JH1:
    SaurJH1_2399
    JH9:
    SaurJH9_2356
    JKD6008:
    SAA6008_02368 (hutU)
    JKD6159:
    SAA6159_02236 (hutU)
    LGA251:
    SARLGA251_21140 (hutU)
    M013:
    M013TW_2289
    MRSA252:
    SAR2417 (hutU)
    MSHR1132:
    SAMSHR1132_21560
    MSSA476:
    SAS2224
    Mu3:
    SAHV_2315 (hutU)
    Mu50:
    SAV2331 (hutU)
    MW2:
    MW2252 (hutU)
    RF122:
    SAB2208c (hutU)
    ST398:
    SAPIG2383 (hutU)
    T0131:
    SAT0131_02515
    TCH60:
    HMPREF0772_10863 (hutU)
    TW20:
    SATW20_24630 (hutU)
    USA300_TCH1516:
    USA300HOU_2311 (hutU)
    VC40:
    SAVC_10520

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MRKIQAKKGLSIECKGWEQEAVLRMLYNNLDPEVAERPEDLVVYGGIGKAARNWEAFEAI
    N315            MRKIQAKKGLSIECKGWEQEAVLRMLYNNLDPEVAERPEDLVVYGGIGKAARNWEAFEAI
    NCTC8325        MRKIQAKKGLSIECKGWEQEAVLRMLYNNLDPEVAERPEDLVVYGGIGKAARNWEAFEAI
    Newman          MRKIQAKKGLSIECKGWEQEAVLRMLYNNLDPEVAERPEDLVVYGGIGKAARNWEAFEAI
    USA300_FPR3757  MRKIQAKKGLSIECKGWEQEAVLRMLYNNLDPEVAERPEDLVVYGGIGKAARNWEAFEAI
                    ************************************************************

    COL             EKTLRELESDETMLVQSGKPVAVFKTHEEAPRVLISNSVLVPEWANWDHFNELDKKGLIM
    N315            EKTLRELESDETMLVQSGKPVAVFKTHEEAPRVLISNSVLVPEWANWDHFNELDKKGLIM
    NCTC8325        EKTLRELESDETMLVQSGKPVAVFKTHEEAPRVLISNSVLVPEWANWDHFNELDKKGLIM
    Newman          EKTLRELESDETMLVQSGKPVAVFKTHEEAPRVLISNSVLVPEWANWDHFNELDKKGLIM
    USA300_FPR3757  EKTLRELESDETMLVQSGKPVAVFKTHEEAPRVLISNSVLVPEWANWDHFNELDKKGLIM
                    ************************************************************

    COL             YGQMTAGSWIYIGSQGIVQGTYETFAELGNQHFNGDLAGTVTLTAGLGGMGGAQPLAITM
    N315            YGQMTAGSWIYIGSQGIVQGTYETFAELGNQHFNGDLAGTVTLTAGLGGMGGAQPLAITM
    NCTC8325        YGQMTAGSWIYIGSQGIVQGTYETFAELGNQHFNGDLAGTVTLTAGLGGMGGAQPLAITM
    Newman          YGQMTAGSWIYIGSQGIVQGTYETFAELGNQHFNGDLAGTVTLTAGLGGMGGAQPLAITM
    USA300_FPR3757  YGQMTAGSWIYIGSQGIVQGTYETFAELGNQHFNGDLAGTVTLTAGLGGMGGAQPLAITM
                    ************************************************************

    COL             NHGVAICVDVDETRVDKRIDTKYCDVKTADLDEALKLAEEAKERGEGLSIGLVGNAVDIH
    N315            NHGVAICVDVDETRVDKRIDTKYCDVKTADLDEALKLAEEAKERGEGLSIGLVGNAVDIH
    NCTC8325        NHGVAICVDVDETRVDKRIDTKYCDVKTADLDEALKLAEEAKERGEGLSIGLVGNAVDIH
    Newman          NHGVAICVDVDETRVDKRIDTKYCDVKTADLDEALKLAEEAKERGEGLSIGLVGNAVDIH
    USA300_FPR3757  NHGVAICVDVDETRVDKRIDTKYCDVKTADLDEALKLAEEAKERGEGLSIGLVGNAVDIH
                    ************************************************************

    COL             QAILEKGFKIDIITDQTSAHDPLNGYVPQGYSVEEAKVLREKDPKKYVELSQASMAKHVE
    N315            QAILEKGFKIDIITDQTSAHDPLNGYVPQGYSVEEAKVLREKDPKKYVELSQASMAKHVE
    NCTC8325        QAILEKGFKIDIITDQTSAHDPLNGYVPQGYSVEEAKVLREKDPKKYVELSQASMAKHVE
    Newman          QAILEKGFKIDIITDQTSAHDPLNGYVPQGYSVEEAKVLREKDPKKYVELSQASMAKHVE
    USA300_FPR3757  QAILEKGFKIDIITDQTSAHDPLNGYVPQGYSVEEAKVLREKDPKKYVELSQASMAKHVE
                    ************************************************************

    COL             LMLEFQKRGAVAFDYGNNIRQVAFNNGVKNAFDFPGFVPAYIRPLFCEGKGPFRFAALSG
    N315            LMLEFQKRGAVAFDYGNNIRQVAFNNGVKNAFDFPGFVPAYIRPLFCEGKGPFRFAALSG
    NCTC8325        LMLEFQKRGAVAFDYGNNIRQVAFNNGVKNAFDFPGFVPAYIRPLFCEGKGPFRFAALSG
    Newman          LMLEFQKRGAVAFDYGNNIRQVAFNNGVKNAFDFPGFVPAYIRPLFCEGKGPFRFAALSG
    USA300_FPR3757  LMLEFQKRGAVAFDYGNNIRQVAFNNGVKNAFDFPGFVPAYIRPLFCEGKGPFRFAALSG
                    ************************************************************

    COL             DPKDIERADEEMRKLFPENEKLLRWLDLAEEKISYQGLPSRIAWLGYGERAKMGLALNRL
    N315            DPKDIERADEEMRKLFPENEKLLRWLDLAEEKISYQGLPSRIAWLGYGERAKMGLALNRL
    NCTC8325        DPKDIERADEEMRKLFPENEKLLRWLDLAEEKISYQGLPSRIAWLGYGERAKMGLALNRL
    Newman          DPKDIERADEEMRKLFPENEKLLRWLDLAEEKISYQGLPSRIAWLGYGERAKMGLALNRL
    USA300_FPR3757  DPKDIERADEEMRKLFPENEKLLRWLDLAEEKISYQGLPSRIAWLGYGERAKMGLALNRL
                    ************************************************************

    COL             VRDGEISAPIVIGRDHLDAGSVASPNRETESMKDGSDAVGDWAVLNALINTAAGGSWISF
    N315            VRDGEISAPIVIGRDHLDAGSVASPNRETESMKDGSDAVGDWAVLNALINTAAGGSWISF
    NCTC8325        VRDGEISAPIVIGRDHLDAGSVASPNRETESMKDGSDAVGDWAVLNALINTAAGGSWISF
    Newman          VRDGEISAPIVIGRDHLDAGSVASPNRETESMKDGSDAVGDWAVLNALINTAAGGSWISF
    USA300_FPR3757  VRDGEISAPIVIGRDHLDAGSVASPNRETESMKDGSDAVGDWAVLNALINTAAGGSWISF
                    ************************************************************

    COL             HHGGGVGMGYSLHAGMVVVADGSERAERRLERVLTTDPGMGVARHVDAGYDIAIQTAKEK
    N315            HHGGGVGMGYSLHAGMVVVADGSERAERRLERVLTTDPGMGVARHVDAGYDIAIQTAKEK
    NCTC8325        HHGGGVGMGYSLHAGMVVVADGSERAERRLERVLTTDPGMGVARHVDAGYDIAIQTAKEK
    Newman          HHGGGVGMGYSLHAGMVVVADGSERAERRLERVLTTDPGMGVARHVDAGYDIAIQTAKEK
    USA300_FPR3757  HHGGGVGMGYSLHAGMVVVADGSERAERRLERVLTTDPGMGVARHVDAGYDIAIQTAKEK
                    ************************************************************

    COL             GIHIPMIDKAGDK
    N315            GIHIPMIDKAGDK
    NCTC8325        GIHIPMIDKAGDK
    Newman          GIHIPMIDKAGDK
    USA300_FPR3757  GIHIPMIDKAGDK
                    *************