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Summary[edit source | edit]

  • pan ID?: SAUPAN005843000
  • symbol?: gltS
  • description?: sodium/glutamate symporter

      descriptions from strain specific annotations:

    • sodium/glutamate symporter
    • sodium:glutamate symporter
    • putative permease
    • ESS family glutamate:sodium (Na+) symporter
    • glutamate permease
  • strand?: +
  • coordinates?: 5919026..5920287
  • synteny block?: BlockID0045880
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL2340 (gltS)
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_2284
    08BA02176:
    C248_2388
    11819-97:
    MS7_2363 (gltS)
    71193:
    ST398NM01_2397
    ECT-R 2:
    ECTR2_2205 (gltS)
    ED133:
    SAOV_2388
    ED98:
    SAAV_2409 (gltS)
    HO 5096 0412:
    SAEMRSA15_22430
    JH1:
    SaurJH1_2415
    JH9:
    SaurJH9_2369
    JKD6008:
    SAA6008_02382 (gltS)
    JKD6159:
    SAA6159_02248 (gltS)
    LGA251:
    SARLGA251_21270
    M013:
    M013TW_2302
    MRSA252:
    SAR2430
    MSHR1132:
    SAMSHR1132_21690
    MSSA476:
    SAS2236
    Mu3:
    SAHV_2329
    Mu50:
    SAV2345
    MW2:
    MW2266
    RF122:
    SAB2224
    ST398:
    SAPIG2397 (gltS)
    T0131:
    SAT0131_02531
    TCH60:
    HMPREF0772_10849 (gltS)
    TW20:
    SATW20_24760
    USA300_TCH1516:
    USA300HOU_2326
    VC40:
    SAVC_10585

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MIELNAITTLCLACILYLLGKAIVNHVNFLKRICIPAPVIGGLIFAILVAALDSFGMVKI
    N315            MIELNAITTLCLACILYLLGTAIVNHVNFLKRICIPAPVIGGLIFAILVAALDSFGMVKI
    NCTC8325        MIELNAITTLCLACILYLLGKAIVNHVNFLKRICIPAPVIGGLIFAILVAALDSFGMVKI
    Newman          MIELNAITTLCLACILYLLGKAIVNHVNFLKRICIPAPVIGGLIFAILVAALDSFGMVKI
    USA300_FPR3757  MIELNAITTLCLACILYLLGKAIVNHVNFLKRICIPAPVIGGLIFAILVAALDSFGMVKI
                    ********************.***************************************

    COL             KLDASFIQDFFMLAFFTTIGLGASLKLFKLGGKVLLLYFMFCAIISVIQNIVGVSLAKVL
    N315            KLDASFIQDFFMLAFFTTIGLGASLKLFKLGGKVLLLYFMFCAIISVIQNIVGVSLAKVL
    NCTC8325        KLDASFIQDFFMLAFFTTIGLGASLKLFKLGGKVLLLYFMFCAIISVIQNIVGVSLAKVL
    Newman          KLDASFIQDFFMLAFFTTIGLGASLKLFKLGGKVLLLYFMFCAIISVIQNIVGVSLAKVL
    USA300_FPR3757  KLDASFIQDFFMLAFFTTIGLGASLKLFKLGGKVLLLYFMFCAIISVIQNIVGVSLAKVL
                    ************************************************************

    COL             NIKPLLGLTAGSMSMEGGHGNAAAYGKTIQDLGIDSALTAALAAATLGLVFGGLIGGPVV
    N315            NIKPLLGLTAGSMSMEGGHGNAAAYGKTIQDLGIDSALTAALAAATLGLVFGGLIGGPVV
    NCTC8325        NIKPLLGLTAGSMSMEGGHGNAAAYGKTIQDLGIDSALTAALAAATLGLVFGGLIGGPVV
    Newman          NIKPLLGLTAGSMSMEGGHGNAAAYGKTIQDLGIDSALTAALAAATLGLVFGGLIGGPVV
    USA300_FPR3757  NIKPLLGLTAGSMSMEGGHGNAAAYGKTIQDLGIDSALTAALAAATLGLVFGGLIGGPVV
                    ************************************************************

    COL             KFLIKRYNLKPQHSDDTFKDYSQVAYNEHLHSKFNATEVFFIQFTIVVFCMAVGSYFSHL
    N315            KYLIKRYNLKPQHSDDTFKDYSQVAYNEHLHSKFNATEVFFIQFTIVVFCMAVGSYFSHL
    NCTC8325        KFLIKRYNLKPQHSDDTFKDYSQVAYNEHLHSKFNATEVFFIQFTIVVFCMAVGSYFSHL
    Newman          KFLIKRYNLKPQHSDDTFKDYSQVAYNEHLHSKFNATEVFFIQFTIVVFCMAVGSYFSHL
    USA300_FPR3757  KFLIKRYNLKPQHSDDTFKDYSQVAYNEHLHSKFNATEVFFIQFTIVVFCMAVGSYFSHL
                    *:**********************************************************

    COL             FTAQTGINVPIYVGSLFVAVIVRNISESFNFNIVDLKITNQIGDVALGIFLSLALMSIQL
    N315            FTAQTGINVPIYVGSLFVAVIVRNISESFNFNIVDLKITNQIGDVALGIFLSLALMSIQL
    NCTC8325        FTAQTGINVPIYVGSLFVAVIVRNISESFNFNIVDLKITNQIGDVALGIFLSLALMSIQL
    Newman          FTAQTGINVPIYVGSLFVAVIVRNISESFNFNIVDLKITNQIGDVALGIFLSLALMSIQL
    USA300_FPR3757  FTAQTGINVPIYVGSLFVAVIVRNISESFNFNIVDLKITNQIGDVALGIFLSLALMSIQL
                    ************************************************************

    COL             IEIYKLAIPLIIIVLVQVVVMILFAVLILFRGLGKDYDAAVMVGGFIGHGLGATPNAMAN
    N315            IEIYKLAIPLIIIVLVQVVVMILFAVLILFRGLGKDYDAAVMVGGFIGHGLGATPNAMAN
    NCTC8325        IEIYKLAIPLIIIVLVQVVVMILFAVLILFRGLGKDYDAAVMVGGFIGHGLGATPNAMAN
    Newman          IEIYKLAIPLIIIVLVQVVVMILFAVLILFRGLGKDYDAAVMVGGFIGHGLGATPNAMAN
    USA300_FPR3757  IEIYKLAIPLIIIVLVQVVVMILFAVLILFRGLGKDYDAAVMVGGFIGHGLGATPNAMAN
                    ************************************************************

    COL             LDVITKKYGNSPKAYLVVPIVGAFLIDLIGVIVIMGFIQWFS
    N315            LDVITKKYGNSPKAYLVVPIVGAFLIDLIGVIVIMGFIQWFS
    NCTC8325        LDVITKKYGNSPKAYLVVPIVGAFLIDLIGVIVIMGFIQWFS
    Newman          LDVITKKYGNSPKAYLVVPIVGAFLIDLIGVIVIMGFIQWFS
    USA300_FPR3757  LDVITKKYGNSPKAYLVVPIVGAFLIDLIGVIVIMGFIQWFS
                    ******************************************