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Summary[edit source | edit]

  • pan ID?: SAUPAN005995000
  • symbol?:
  • description?: 2-dehydropantoate 2-reductase

      descriptions from strain specific annotations:

    • 2-dehydropantoate 2-reductase
    • putative ketopantoate reductase
  • strand?: -
  • coordinates?: 6055945..6056880
  • synteny block?: BlockID0047390
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    NWMN_2342 (apbA)
    USA300_FPR3757:
    04-02981:
    SA2981_2380
    08BA02176:
    C248_2493
    11819-97:
    MS7_2457
    71193:
    ST398NM01_2495
    ECT-R 2:
    ECTR2_2301 (panE)
    ED133:
    SAOV_2493c
    ED98:
    SAAV_2509
    HO 5096 0412:
    SAEMRSA15_23430
    JH1:
    SaurJH1_2518
    JH9:
    SaurJH9_2470
    JKD6008:
    SAA6008_02485 (apbA)
    JKD6159:
    SAA6159_02341 (apbA)
    LGA251:
    SARLGA251_22240
    M013:
    M013TW_2406
    MRSA252:
    SAR2533
    MSHR1132:
    SAMSHR1132_22710
    MSSA476:
    SAS2335
    Mu3:
    SAHV_2427
    Mu50:
    SAV2443
    MW2:
    MW2367
    RF122:
    SAB2325c
    ST398:
    SAPIG2495 (panE)
    T0131:
    SAT0131_02642 (acpP)
    TCH60:
    HMPREF0772_10745 (panE2)
    TW20:
    SATW20_25720
    USA300_TCH1516:
    USA300HOU_2432 (panE1)
    VC40:
    SAVC_11090

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MKIAIAGSGALGSGFGAKLFQAGYDVTLIDGYTSHVEAVKQHGLNITINGEAFELNIPMY
    N315            MKIAIAGSGALGSGFGAKLFQAGYDVTLIDGYTSHVEAVKQHGLNITINGEAFELNIPMY
    NCTC8325        MKIAIAGSGALGSGFGAKLFQAGYDVTLIDGYTSHVEAVKQHGLNITINGEAFELNIPMY
    Newman          MKIAIAGSGALGSGFGAKLFQAGYDVTLIDGYTSHVEAVKQHGLNITINGEAFELNIPMY
    USA300_FPR3757  MKIAIAGSGALGSGFGAKLFQAGYDVTLIDGYTSHVEAVKQHGLNITINGEAFELNIPMY
                    ************************************************************

    COL             HFNDQPDESIYDVVFLFPKSMQLKEVMEDMKPHIDNETIVVCTMNGLKHEEVIAQYVAQS
    N315            HFNDQRDESIYDVVFLFPKSMQLKEVMEDMKPHIDNETIVVCTMNGLKHEEVIAQYVAQS
    NCTC8325        HFNDQPDESIYDVVFLFPKSMQLKEVMEDMKPHIDNETIVVCTMNGLKHEEVIAQYVAQS
    Newman          HFNDQPDESIYDVVFLFPKSMQLKEVMEDMKPHIDNETIVVCTMNGLKHEEVIAQYVAQS
    USA300_FPR3757  HFNDQPDESIYDVVFLFPKSMQLKEVMEDMKPHIDNETIVVCTMNGLKHEEVIAQYVAQS
                    ***** ******************************************************

    COL             QIVRGVTTWTAGLESPGHSHLLGSGPVEIGELVDEGKENVIKVADLLNEAELNGVISKDL
    N315            QIVRGVTTWTAGLESPGHSHLLGSGPVEIGELVDEGKENVIKVADLLNEAELNGVISKDL
    NCTC8325        QIVRGVTTWTAGLESPGHSHLLGSGPVEIGELVDEGKENVIKVADLLNEAELNGVISKDL
    Newman          QIVRGVTTWTAGLESPGHSHLLGSGPVEIGELVDEGKENVIKVADLLNEAELNGVISKDL
    USA300_FPR3757  QIVRGVTTWTAGLESPGHSHLLGSGPVEIGELVDEGKENVIKVADLLNEAELNGVISKDL
                    ************************************************************

    COL             YQSIWKKICVNGTANALSTVLECNMASLNESSYAKCLIYKLTQEIVHVATIDNVHLNVDE
    N315            YQSIWKKICVNGTANALSTVLECNMASLNESSYAKCLIYKLTQEIVHVATIDNVHLNVDE
    NCTC8325        YQSIWKKICVNGTANALSTVLECNMASLNESSYAKCLIYKLTQEIVHVATIDNVHLNVDE
    Newman          YQSIWKKICVNGTANALSTVLECNMASLNESSYAKCLIYKLTQEIVHVATIDNVHLNVDE
    USA300_FPR3757  YQSIWKKICVNGTANALSTVLECNMASLNESSYAKCLIYKLTQEIVHVATIDNVHLNVDE
                    ************************************************************

    COL             VFEYLVDLNEKVGAHYPSMYQDLIVNNRKTEIDYINGAVATLGKQRHIEAPVNRFITDLI
    N315            AFEYLVDLNEKVGAHYPSMYQDLIVNNRKTEIDYINGAVATLGKQRHIEAPVNRFITDLI
    NCTC8325        VFEYLVDLNEKVGAHYPSMYQDLIVNNRKTEIDYINGAVATLGKQRHIEAPVNRFITDLI
    Newman          VFEYLVDLNEKVGAHYPSMYQDLIVNNRKTEIDYINGAVATLGKQRHIEAPVNRFITDLI
    USA300_FPR3757  VFEYLVDLNEKVGAHYPSMYQDLIVNNRKTEIDYINGAVATLGKQRHIEAPVNRFITDLI
                    .***********************************************************

    COL             HTKESQRHAQD
    N315            HTKESQRHAQD
    NCTC8325        HTKESQRHAQD
    Newman          HTKESQRHAQD
    USA300_FPR3757  HTKESQRHAQD
                    ***********