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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006293000
- symbol?: panB
- synonym:
- description?: 3-methyl-2-oxobutanoate hydroxymethyltransferase
- 3-methyl-2-oxobutanoate hydroxymethyltransferase
- 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB
- putative 3-methyl-2-oxobutanoatehydroxymethyltransferase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6341397..6342188
- synteny block?: BlockID0050090
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2537 (panB)
08BA02176:
C248_2658 (panB)
11819-97:
MS7_2604 (panB)
6850:
RSAU_002440 (panB)
71193:
ST398NM01_2647
ECT-R 2:
ECTR2_2453 (panB)
ED133:
SAOV_2643c
ED98:
SAAV_2665 (panB)
HO 5096 0412:
SAEMRSA15_25020 (panB)
JH1:
SaurJH1_2675 (panB)
JH9:
SaurJH9_2621 (panB)
JKD6008:
SAA6008_02656 (panB)
JKD6159:
SAA6159_02495 (panB)
LGA251:
SARLGA251_23720 (panB)
M013:
M013TW_2576
MRSA252:
SAR2677 (panB)
MSHR1132:
SAMSHR1132_24140
MSSA476:
SAS2484 (panB)
Mu3:
SAHV_2583 (panB)
Mu50:
SAV2599 (panB)
MW2:
MW2518 (panB)
RF122:
SAB2472c (panB)
ST398:
SAPIG2647 (panB)
T0131:
SAT0131_02831 (mscL)
TCH60:
HMPREF0772_10593 (panB)
TW20:
SATW20_27380 (panB)
USA300_TCH1516:
USA300HOU_2593 (panB)
VC40:
SAVC_11865 (panB)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKTVSQLIDMKQKETKISMVTAYDFPSAKQVEAAGIDMILVGDSLGMTVLGYESTVQVTL
N315 MKTVSQLIDMKQKQTKISMVTAYDFPSAKQVEAAGIDMILVGDSLGMTVLGYESTVQVTL
NCTC8325 ---------MKQKQTKISMVTAYDFPSAKQVEAAGIDMILVGDSLGMTVLGYESTVQVTL
Newman MKTVSQLIDMKQKQTKISMVTAYDFPSAKQVEAAGIDMILVGDSLGMTVLGYESIVQVTL
USA300_FPR3757 ---------MKQKQTKISMVTAYDFPSAKQVEAAGIDMILVGDSLGMTVLGYESTVQVTL
****:**************************************** *****
COL ADMIHHGRAVRRGAPNTFVVVDMPIGAVGISMTQDLNHALKLYQETNANAIKAEGAHITP
N315 ADMIHHGRAVRRGAPNTFVVVDMPIGAVGISMTQDLNHALKLYQETNANAIKAEGAHITP
NCTC8325 ADMIHHGRAVRRGAPNTFVVVDMPIGAVGISMTQDLNHALKLYQETNANAIKAEGAHITP
Newman ADMIHHGRAVRRGAPNTFVVVDMPIGAVGISMTQDLNHALKLYQETNANAIKAEGAHITP
USA300_FPR3757 ADMIHHGRAVRRGAPNTFVVVDMPIGAVGISMTQDLNHALKLYQETNANAIKAEGAHITP
************************************************************
COL FIEKATAIGIPVVAHLGLTPQSVGVMGYKLQGATKEAAEQLILDAKNVEQAGAVALVLEA
N315 FIEKATAIGIPVVAHLGLTPQSVGVMGYKLQGATKEAAEQLILDAKNVEQAGAVALVLEA
NCTC8325 FIEKATAIGIPVVAHLGLTPQSVGVMGYKLQGATKEAAEQLILDAKNVEQAGAVALVLEA
Newman FIEKATAIGIPVVAHLGLTPQSVGVMGYKLQGATKEAAEQLILDAKNVEQAGAVALVLEA
USA300_FPR3757 FIEKATAIGIPVVAHLGLTPQSVGVMGYKLQGATKEAAEQLILDAKNVEQAGAVALVLEA
************************************************************
COL IPNDLAEEISKHLTIPVIGIGAGKGTDGQVLVYHDMLNYGVEHKAKFVKQFADFSVGVDG
N315 IPNDLAEEISKHLTIPVIGIGAGKGTDGQVLVYHDMLNYGVEHKAKFVKQFADFSVGVDG
NCTC8325 IPNDLAEEISKHLTIPVIGIGAGKGTDGQVLVYHDMLNYGVEHKAKFVKQFADFSVGVDG
Newman IPNDLAEEISKHLTIPVIGIGAGKGTDGQVLVYHDMLNYGVEHKAKFVKQFADFSVGVDG
USA300_FPR3757 IPNDLAEEISKHLTIPVIGIGAGKGTDGQVLVYHDMLNYGVEHKAKFVKQFADFSVGVDG
************************************************************
COL LKQYDQEVKSGAFPSEEYTYKKKIMNEVNNND
N315 LKQYDQEVKSGAFPSEEYTYKKKIMNEVNNND
NCTC8325 LKQYDQEVKSGAFPSEEYTYKKKIMNEVNNND
Newman LKQYDQEVKSGAFPSEEYTYKKKIMNEVNNND
USA300_FPR3757 LKQYDQEVKSGAFPSEEYTYKKKIMNEVNNND
********************************