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Summary[edit source | edit]

  • pan ID?: SAUPAN006294000
  • symbol?: panE
  • description?: 2-dehydropantoate 2-reductase

      descriptions from strain specific annotations:

    • 2-dehydropantoate 2-reductase
    • putative ketopantoate reductase
  • strand?: +
  • coordinates?: 6342288..6343148
  • synteny block?: BlockID0050100
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    NWMN_2497 (panE)
    USA300_FPR3757:
    04-02981:
    SA2981_2538
    08BA02176:
    C248_2659
    11819-97:
    MS7_2605
    71193:
    ST398NM01_2648
    ECT-R 2:
    ECTR2_2454 (panE)
    ED133:
    SAOV_2644
    ED98:
    SAAV_2666
    HO 5096 0412:
    SAEMRSA15_25030
    JH1:
    SaurJH1_2676
    JH9:
    SaurJH9_2622
    JKD6008:
    SAA6008_02657 (panE)
    JKD6159:
    SAA6159_02496 (panE)
    LGA251:
    SARLGA251_23730
    M013:
    M013TW_2577
    MRSA252:
    SAR2678
    MSHR1132:
    SAMSHR1132_24150
    MSSA476:
    SAS2485
    Mu3:
    SAHV_2584
    Mu50:
    SAV2600
    MW2:
    MW2519
    RF122:
    SAB2473
    ST398:
    SAPIG2648 (panE)
    T0131:
    SAT0131_02832 (hisZ)
    TCH60:
    HMPREF0772_10592 (panE)
    TW20:
    SATW20_27390
    USA300_TCH1516:
    USA300HOU_2594 (panE2)
    VC40:
    SAVC_11870

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTN
    N315            MLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTN
    NCTC8325        MLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTN
    Newman          MLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTN
    USA300_FPR3757  MLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTN
                    ************************************************************

    COL             TFDVIIIAVKTHQLDAVIPHLTHLAHEDTLIILAQNGYGQLEHISFKNVCQAVVYISGQK
    N315            TFDVIIIAVKTHQLDAVIPHLTYLAHEDTLIILAQNGYGQLEHIPFKNVCQAVVYISGQK
    NCTC8325        TFDVIIIAVKTHQLDAVIPHLTHLAHEDTLIILAQNGYGQLEHISFKNVCQAVVYISGQK
    Newman          TFDVIIIAVKTHQLDAVIPHLTHLAHEDTLIILAQNGYGQLEHISFKNVCQAVVYISGQK
    USA300_FPR3757  TFDVIIIAVKTHQLDAVIPHLTHLAHEDTLIILAQNGYGQLEHISFKNVCQAVVYISGQK
                    **********************:*********************.***************

    COL             KGDVVTHFRDYQLRIQDNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITA
    N315            KGDVVTHFRDYQLRIQDNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITA
    NCTC8325        KGDVVTHFRDYQLRIQDNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITA
    Newman          KGDVVTHFRDYQLRIQDNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITA
    USA300_FPR3757  KGDVVTHFRDYQLRIQDNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITA
                    ************************************************************

    COL             LGRQTVAIMHNPEIRTLCRQLLLDGCRVAQAEGLNFSEQTVDTIMTIYQGYPDEMGTSMY
    N315            LGRQTVAIMHNPEIRILCRQLLLDGCRVAQAEGLNFSEQTVDTIMTIYQGYPDEMGTSMY
    NCTC8325        LGRQTVAIMHNPEIRTLCRQLLLDGCRVAQAEGLNFSEQTVDTIMTIYQGYPDEMGTSMY
    Newman          LGRQTVAIMHNPEIRTLCRQLLLDGCRVAQAEGLNFSEQTVDTIMTIYQGYPDEMGTSMY
    USA300_FPR3757  LGRQTVAIMHNPEIRTLCRQLLLDGCRVAQAEGLNFSEQTVDTIMTIYQGYPDEMGTSMY
                    *************** ********************************************

    COL             YDIAHQQPLEVEAIQGFIYRRAREHNLDTPYLDTIYSFLRAYQQNM
    N315            YDIVHQQPLEVEAIQGFIYRRAREHNLDTPYLDTIYSFLRAYQQNM
    NCTC8325        YDIAHQQPLEVEAIQGFIYRRAREHILDTPYLDTIYSFLRAYQQNM
    Newman          YDIAHQQPLEVEAIQGFIYRRAREHNLDTPYLDTIYSFLRAYQQNM
    USA300_FPR3757  YDIAHQQPLEVEAIQGFIYRRAREHNLDTPYLDTIYSFLRAYQQNM
                    ***.********************* ********************