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Summary[edit source | edit]

  • pan ID?: SAUPAN006295000
  • symbol?: budA2
  • description?: alpha-acetolactate decarboxylase

      descriptions from strain specific annotations:

    • alpha-acetolactate decarboxylase
    • Acetolactate decarboxylase
    • putative alpha-acetolactate decarboxylase
  • strand?: -
  • coordinates?: 6343238..6343942
  • synteny block?: BlockID0050110
  • occurrence?: in 97% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL2617 (budA2)
    N315:
    NCTC8325:
    Newman:
    NWMN_2498 (aldB)
    USA300_FPR3757:
    04-02981:
    SA2981_2539
    08BA02176:
    C248_2660
    11819-97:
    MS7_2606
    71193:
    ST398NM01_2649
    ECT-R 2:
    ECTR2_2455 (budA)
    ED133:
    SAOV_2645c
    ED98:
    SAAV_2667 (budA2)
    HO 5096 0412:
    SAEMRSA15_25040
    JH1:
    SaurJH1_2677
    JH9:
    SaurJH9_2623
    JKD6008:
    SAA6008_02658 (budA2)
    JKD6159:
    SAA6159_02497 (budA2)
    LGA251:
    SARLGA251_23740
    M013:
    M013TW_2578
    MRSA252:
    SAR2679
    MSHR1132:
    SAMSHR1132_24160
    MSSA476:
    SAS2486
    Mu3:
    SAHV_2585
    Mu50:
    SAV2601
    MW2:
    MW2520
    RF122:
    SAB2474c
    ST398:
    SAPIG2649 (budA)
    T0131:
    SAT0131_02833
    TCH60:
    HMPREF0772_10591 (budA)
    TW20:
    SATW20_27400
    USA300_TCH1516:
    VC40:
    SAVC_11875

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MTNVLYQHGTLGTLMAGLLEGTATINELLEHGNLGIATLTGSDGEVIFLDGKAYHANEHK
    N315            MTNVLYQHGTLGTLMAGLLEGTATINELLEHGNLGIATLTGSDGEVIFLDGKAYHANEHK
    NCTC8325        MTNVLYQHGTLGTLMAGLLEGTATINELLEHGNLGIATLTGSDGEVIFLDGKAYHANEHK
    Newman          MTNVLYQHGTLGTLMAGLLEGTATINELLEHGNLGIATLTGSDGEVIFLDGKAYHANEHK
    USA300_FPR3757  MTNVLYQHGTLGTLMAGLLEGTATINELLEHGNLGIATLTGSDGEVIFLDGKAYHANEHK
                    ************************************************************

    COL             EFIELKGDEKVPYASITNFKASKTFPLQQLSQDDVFAQIKNEMLSENLFSAVKIYGTFKH
    N315            EFIELKGDEKVPYASITNFKASKTFPLQQLSQDDVFAQIKNEMLSENLFSAVKIYGTFKH
    NCTC8325        EFIELKGDEKVPYASITNFKASKTFPLQQLSQDDVFAQIKNEMLSENLFSAVKIYGTFKH
    Newman          EFIELKGDEKVPYASITNFKASKTFPLQQLSQDDVFAQIKNEMLSENLFSAVKIYGTFKH
    USA300_FPR3757  EFIELKGDEKVPYASITNFKASKTFPLQQLSQDDVFAQIKNEMLSENLFSAVKIYGTFKH
                    ************************************************************

    COL             MHVRMMPAQQPPYTRLIDSARRQPEEKRQDIRGAIVGFFTPELFHGVGSAGFHIHFADDE
    N315            MHVRMMPAQQPPYTRLIDSARRQPEEKRQDIRGAIVGFFTPELFHGVGSAGFHIHFADDE
    NCTC8325        MHVRMMPAQQPPYTRLIDSARRQPEEKRQDIRGAIVGFFTPELFHGVGSAGFHIHFADDE
    Newman          MHVRMMPAQQPPYTRLIDSARRQPEEKRQDIRGAIVGFFTPELFHGVGSAGFHIHFADDE
    USA300_FPR3757  MHVRMMPAQQPPYTRLIDSARRQPEEKRQDIRGAIVGFFTPELFHGVGSAGFHIHFADDE
                    ************************************************************

    COL             RAYGGHVLDFEVDDVVVEIQNFETFQQHFPVNNETFVKAKIDYNDVAEEIREAE
    N315            RAYGGHVLDFEVDDVVVEIQNFETFQQHFPVNNETFVKAKIDYKDVAEEIREAE
    NCTC8325        RAYGGHVLDFEVDDVVVEIQNFETFQQHFPVNNETFVKAKIDYKDVAEEIREAE
    Newman          RAYGGHVLDFEVDDVVVEIQNFETFQQHFPVNNETFVKAKIDYNDVAEEIREAE
    USA300_FPR3757  RAYGGHVLDFEVDDVVVEIQNFETFQQHFPVNNETFVKAKIDYKDVAEEIREAE
                    *******************************************:**********