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Summary[edit source | edit]

  • pan ID?: SAUPAN006306000
  • symbol?: lqo
  • description?: malate:quinone oxidoreductase

      descriptions from strain specific annotations:

    • malate:quinone oxidoreductase
    • malate dehydrogenase (acceptor)
    • putative malate:quinone oxidoreductase 2
  • strand?: -
  • coordinates?: 6351389..6352885
  • synteny block?: BlockID0050220
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL2623 (mqo2)
    N315:
    SA2400 (mqo2)
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_2545 (mqo2)
    08BA02176:
    C248_2666 (mqo2)
    11819-97:
    MS7_2612
    71193:
    ST398NM01_2655
    ECT-R 2:
    ECTR2_2461 (mqo)
    ED133:
    SAOV_2651c
    ED98:
    SAAV_2673 (mqo2)
    HO 5096 0412:
    SAEMRSA15_25110 (mqo2)
    JH1:
    SaurJH1_2683
    JH9:
    SaurJH9_2629
    JKD6008:
    SAA6008_02664 (mqo2)
    JKD6159:
    SAA6159_02503 (mqo2)
    LGA251:
    SARLGA251_23800 (mqo2)
    M013:
    M013TW_2585
    MRSA252:
    SAR2685 (mqo2)
    MSHR1132:
    SAMSHR1132_24220
    MSSA476:
    SAS2492
    Mu3:
    SAHV_2591 (mqo2)
    Mu50:
    SAV2607 (mqo2)
    MW2:
    MW2526 (mqo2)
    RF122:
    SAB2480c (mqo)
    ST398:
    SAPIG2655 (mqo)
    T0131:
    SAT0131_02839
    TCH60:
    HMPREF0772_10585 (mdh)
    TW20:
    SATW20_27460 (mqo2)
    USA300_TCH1516:
    USA300HOU_2600 (mqo2)
    VC40:
    SAVC_11900

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MAKSNSKDIVLIGAGVLSTTFGSMLKEIEPDWNIHVYERLDRPAIESSNERNNAGTGHAA
    N315            MAKSNSKDIVLIGAGVLSTTFGSMLKEIEPDWNIHVYERLDRPAIESSNERNNAGTGHAA
    NCTC8325        MAKSNSKDIVLIGAGVLSTTFGSMLKEIEPDWNIHVYERLDRPAIESSNERNNAGTGHAA
    Newman          MAKSNSKDIVLIGAGVLSTTFGSMLKEIEPDWNIHVYERLDRPAIESSNERNNAGTGHAA
    USA300_FPR3757  MAKSNSKDIVLIGAGVLSTTFGSMLKEIEPDWNIHVYERLDRPAIESSNERNNAGTGHAA
                    ************************************************************

    COL             LCELNYTVLQPDGSIDIEKAKVINEEFEISKQFWGHLVKSGSIENPREFINPLPHISYVR
    N315            LCELNYTVLQPDGSIDIEKAKVINEEFEISKQFWGHLVKSGSIENPREFINPLPHISYVR
    NCTC8325        LCELNYTVLQPDGSIDIEKAKVINEEFEISKQFWGHLVKSGSIENPREFINPLPHISYVR
    Newman          LCELNYTVLQPDGSIDIEKAKVINEEFEISKQFWGHLVKSGSIENPREFINPLPHISYVR
    USA300_FPR3757  LCELNYTVLQPDGSIDIEKAKVINEEFEISKQFWGHLVKSGSIENPREFINPLPHISYVR
                    ************************************************************

    COL             GKNNVKFLKDRYEAMKAFPMFDNIEYTEDIEVMKKWIPLMMKGREDNPGIMAASKIDEGT
    N315            GKNNVKFLKDRYEAMKAFPMFDNIEYTEDIEVMKKWIPLMMKGREDNPGIMAASKIDEGT
    NCTC8325        GKNNVKFLKDRYEAMKAFPMFDNIEYTEDIEVMKKWIPLMMKGREDNPGIMAASKIDEGT
    Newman          GKNNVKFLKDRYEAMKAFPMFDNIEYTEDIEVMKKWIPLMMKGREDNPGIMAASKIDEGT
    USA300_FPR3757  GKNNVKFLKDRYEAMKAFPMFDNIEYTEDIEVMKKWIPLMMKGREDNPGIMAASKIDEGT
                    ************************************************************

    COL             DVNFGELTRKMAKSIEAHPNATVQFNHEVVDFEQLSNGQWEVTVKNRLTGEKFKQVTDYV
    N315            DVNFGELTRKMAKSIEAHPNATVQFNHEVVDFEQLSNGQWEVTVKNRLTGEKFKQVTDYV
    NCTC8325        DVNFGELTRKMAKSIEAHPNATVQFNHEVVDFEQLSNGQWEVTVKNRLTGEKFKQVTDYV
    Newman          DVNFGELTRKMAKSIEAHPNATVQFNHEVVDFEQLSNGQWEVTVKNRLTGEKFKQVTDYV
    USA300_FPR3757  DVNFGELTRKMAKSIEAHPNATVQFNHEVVDFEQLSNGQWEVTVKNRLTGEKFKQVTDYV
                    ************************************************************

    COL             FIGAGGGAIPLLQKTGIPESKHLGGFPISGQFLACTNPQVIEQHDAKVYGKEPPGTPPMT
    N315            FIGAGGGAIPLLQKTGIPESKHLGGFPISGQFLACTNPQVIEQHDAKVYGKEPPGTPPMT
    NCTC8325        FIGAGGGAIPLLQKTGIPESKHLGGFPISGQFLACTNPQVIEQHDAKVYGKEPPGTPPMT
    Newman          FIGAGGGAIPLLQKTGIPESKHLGGFPISGQFLACTNPQVIEQHDAKVYGKEPPGTPPMT
    USA300_FPR3757  FIGAGGGAIPLLQKTGIPESKHLGGFPISGQFLACTNPQVIEQHDAKVYGKEPPGTPPMT
                    ************************************************************

    COL             VPHLDTRYIDGQRTLLFGPFANVGPKFLKNGSNLDLFKSVKTYNITTLLAAAVKNLPLIK
    N315            VPHLDTRYIDGQRTLLFGPFANVGPKFLKNGSNLDLFKSVKTYNITTLLAAAVKNLPLIK
    NCTC8325        VPHLDTRYIDGQRTLLFGPFANVGPKFLKNGSNLDLFKSVKTYNITTLLAAAVKNLPLIK
    Newman          VPHLDTRYIDGQRTLLFGPFANVGPKFLKNGSNLDLFKSVKTYNITTLLAAAVKNLPLIK
    USA300_FPR3757  VPHLDTRYIDGQRTLLFGPFANVGPKFLKNGSNLDLFKSVKTYNITTLLAAAVKNLPLIK
                    ************************************************************

    COL             YSFDQVIMTKEGCMNHLRTFYPEARNEDWQLYTAGKRVQVIKDTPEHGKGFIQFGTEVVN
    N315            YSFDQVIMTKEGCMNHLRTFYPEARNEDWQLYTAGKRVQVIKDTPEHGKGFIQFGTEVVN
    NCTC8325        YSFDQVIMTKEGCMNHLRTFYPEARNEDWQLYTAGKRVQVIKDTPEHGKGFIQFGTEVVN
    Newman          YSFDQVIMTKEGCMNHLRTFYPEARNEDWQLYTAGKRVQVIKDTPEHGKGFIQFGTEVVN
    USA300_FPR3757  YSFDQVIMTKEGCMNHLRTFYPEARNEDWQLYTAGKRVQVIKDTPEHGKGFIQFGTEVVN
                    ************************************************************

    COL             SQDHTVIALLGESPGASTSVSVALEVLERNFPEYKTEWAPKIKKMIPSYGESLIEDEKLM
    N315            SQDHTVIALLGESPGASTSVSVALEVLERNFPEYKTEWAPKIKKMIPSYGESLIEDEKLM
    NCTC8325        SQDHTVIALLGESPGASTSVSVALEVLERNFPEYKTEWAPKIKKMIPSYGESLIEDEKLM
    Newman          SQDHTVIALLGESPGASTSVSVALEVLERNFPEYKTEWAPKIKKMIPSYGESLIEDEKLM
    USA300_FPR3757  SQDHTVIALLGESPGASTSVSVALEVLERNFPEYKTEWAPKIKKMIPSYGESLIEDEKLM
                    ************************************************************

    COL             RKIRKQTSKDLELGYYEN
    N315            RKIRKQTSKDLELGYYEN
    NCTC8325        RKIRKQTSKDLELGYYEN
    Newman          RKIRKQTSKDLELGYYEN
    USA300_FPR3757  RKIRKQTSKDLELGYYEN
                    ******************