PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN006349000
• symbol^?: phoB
• synonym:
• description^?: alkaline phosphatase

  descriptions from strain specific annotations:

  • alkaline phosphatase
  • alkaline phosphatase III
  • alkaline phosphatase III, precursor
  • alkaline phosphatase III precursor
  • alkaline phosphatase 3 (Alkaline phosphataseIII) (APase III)
  • alkaline phosphatase family protein
  • alkaline phosphatase PhoA
  • pseudogene
• strand^?: +
• coordinates^?: 6385946..6388444
• synteny block^?: BlockID0050590
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL2648
N315:
SA2420 (phoB)
NCTC8325:
SAOUHSC_02958
Newman:
NWMN_2526 (phoB)
USA300_FPR3757:
SAUSA300_2561 (phoB)
04-02981:
SA2981_2566 (phoB)
08BA02176:
C248_2694 (phoB)
11819-97:
MS7_2632 (phoB)
6850:
RSAU_002470
71193:
ST398NM01_2676
ECT-R 2:
ECTR2_2481
ED133:
SAOV_2675
ED98:
SAAV_2695
HO 5096 0412:
SAEMRSA15_25310 (phoB)
JH1:
SaurJH1_2706
JH9:
SaurJH9_2650
JKD6008:
SAA6008_02686 (phoA)
JKD6159:
SAA6159_02523 (phoA)
LGA251:
SARLGA251_23990 (phoB)
M013:
M013TW_2606
MRSA252:
SAR2706 (phoB)
MSHR1132:
SAMSHR1132_24500
MSSA476:
SAS2513
Mu3:
SAHV_2611 (phoB)
Mu50:
SAV2627 (phoB)
MW2:
MW2547 (phoB)
RF122:
SAB2502 (phoB)
ST398:
SAPIG2676
T0131:
SAT0131_02890
TCH60:
HMPREF0772_10562 (phoB)
TW20:
SATW20_27650 (phoB)
USA300_TCH1516:
USA300HOU_2626
VC40:
SAVC_12010

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MLSVKKATKFAVANLIIVSTVFSSVTPAIAQSDKSSKDESFAVGNTKNPKNVIFLVGDGM
  N315            MLSVKKATKFAVANLIIVSTVFSSVTPAIAQSDKSSKDESFAVGNTKNPKNVIFLVGDGM
  NCTC8325        MLSVKKATKFAVANLIIVSTVFSSVTPAIAQSDKSSKDESFAVGNTKNPKNVIFLVGDGM
  Newman          MLSVKKATKFAVANLIIVSTVFSSVTPAIAQSDKSSKDESFAVGNTKNPKNVIFLVGDGM
  USA300_FPR3757  MLSVKKATKFAVANLIIVSTVFSSVTPAIAQSDKSSKDESFAVGNTKNPKNVIFLVGDGM
                  ************************************************************
  
  COL             GPSFNTAYRYYKNDPHAKEMTPTAFDSYLKGTNRTYSNDPKQNITDSAAGGTAFSSGHKT
  N315            GPSFNTAYRYYKNDSHAKEMTPTAFDSYLKGTNRTYSNDPKQNITDSAAGGTAFSSGHKT
  NCTC8325        GPSFNTAYRYYKNDPHAKEMTPTAFDSYLKGTNRTYSNDPKQNITDSAAGGTAFSSGHKT
  Newman          GPSFNTAYRYYKNDPHAKEMTPTAFDSYLKGTNRTYSNDPKQNITDSAAGGTAFSSGHKT
  USA300_FPR3757  GPSFNTAYRYYKNDPHAKEMTPTAFDSYLKGTNRTYSNDPKQNITDSAAGGTAFSSGHKT
                  **************.*********************************************
  
  COL             YNGAIGVDSNKQKVKTVLERAKEKGKSTGLVSTAELTDATPAAYAAHVTSRDDKNEIAKQ
  N315            YNGAIGVDSNKQKVKTVLERAKEKGKSTGLVSTAELTDATPAAYAAHVTSRDDKNEIAKQ
  NCTC8325        YNGAIGVDSNKQKVKTVLERAKEKGKSTGLVSTAELTDATPAAYAAHVTSRDDKNEIAKQ
  Newman          YNGAIGVDSNKQKVKTVLERAKEKGKSTGLVSTAELTDATPAAYAAHVTSRDDKNEIAKQ
  USA300_FPR3757  YNGAIGVDSNKQKVKTVLERAKEKGKSTGLVSTAELTDATPAAYAAHVTSRDDKNEIAKQ
                  ************************************************************
  
  COL             FYKDKINGKHKVDVLLGGGAKYFGKSNGNLDKKFKKDGYDLATNSKELSKSDKDKVLGLF
  N315            FYKDKINGKHKVDVLLGGGAKYFGKSNGNLDKKFKKDGYDLATNSKDLSKSDKDKVLGLF
  NCTC8325        FYKDKINGKHKVDVLLGGGAKYFGKSNGNLDKKFKKDGYDLATNSKELSKSDKDKVLGLF
  Newman          FYKDKINGKHKVDVLLGGGAKYFGKSNGNLDKKFKKDGYDLATNSKELSKSDKDKVLGLF
  USA300_FPR3757  FYKDKINGKHKVDVLLGGGAKYFGKSNGNLDKKFKKDGYDLATNSKELSKSDKDKVLGLF
                  **********************************************:*************
  
  COL             ADKNMPLAIDASKDEPSLADMQQSALSKLERNKKGFFLMVEGASIDKSAHSNDITGVMSE
  N315            ADKNMPLAIDASKDEPSLADMQQSALSKLERNKKGFFLMVEGASIDKSAHSNDITGVMSE
  NCTC8325        ADKNMPLAIDASKDEPSLADMQQSALSKLERNKKGFFLMVEGASIDKSAHSNDITGVMSE
  Newman          ADKNMPLAIDASKDEPSLADMQQSALSKLERNKKGFFLMVEGASIDKSAHSNDITGVMSE
  USA300_FPR3757  ADKNMPLAIDASKDEPSLADMQQSALSKLERNKKGFFLMVEGASIDKSAHSNDITGVMSE
                  ************************************************************
  
  COL             MEGFEKAFDDAIQYAKKHKDTLVVATADHSTGGLTIGKDKGYEWNPQPIKSMKHSGSYMT
  N315            MEGFEKAFDDAIQYAKKHKDTLVVATADHSTGGLTIGKDKGYEWNPQPIKSMKHSGSYMT
  NCTC8325        MEGFEKAFDDAIQYAKKHKDTLVVATADHSTGGLTIGKDKGYEWNPQPIKSMKHSGSYMT
  Newman          MEGFEKAFDDAIQYAKKHKDTLVVATADHSTGGLTIGKDKGYEWNPQPIKSMKHSGSYMT
  USA300_FPR3757  MEGFEKAFDDAIQYAKKHKDTLVVATADHSTGGLTIGKDKGYEWNPQPIKSMKHSGSYMT
                  ************************************************************
  
  COL             EKMAKGEDPEKVINEGYGFEFSQDDMKKVKKENKKLKRLLKKEKDEKSAEVETQTKALQH
  N315            EKMAKGEDPEKVINEGYGFEFSQDDMKKVKKENKKLQKLLKKEKDEKSADVEKQTKALQH
  NCTC8325        EKMAKGEDPEKVINEGYGFEFSQDDMKKVKKENKKLKRLLKKEKDEKSAEVETQTKALQH
  Newman          EKMAKGEDPEKVINEGYGFEFSQDDMKKVKKENKKLKRLLKKEKDEKSAEVETQTKALQH
  USA300_FPR3757  EKMAKGEDPEKVINEGYGFEFSQDDMKKVKKENKKLKRLLKKEKDEKSAEVETQTKALQH
                  ************************************::***********:**.*******
  
  COL             AIQKPVNDKSYTGWTSDGHTGEDVNTYAYGPRSESFSGNIENTESAKIIFDIFK
  N315            AIQKPVNDKSYTGWTSDGHTGEDVNTYAYGPRSESFSGNIENTESAKIIFDIFK
  NCTC8325        AIQKPVNDKSYTGWTSDGHTGEDVNTYAYGPRSESFSGNIENTESAKIIFDIFK
  Newman          AIQKPVNDKSYTGWTSDGHTGEDVNTYAYGPRSESFSGNIENTESAKIIFDIFK
  USA300_FPR3757  AIQKPVNDKSYTGWTSDGHTGEDVNTYAYGPRSESFSGNIENTESAKIIFDIFK
                  ******************************************************