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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006387000
- symbol?: asp1
- synonym:
- description?: accessory Sec system protein Asp1
- accessory Sec system protein Asp1
- accessory secretory protein Asp1
- accessory secretory protein Asp1, putative
- accessory Sec system asp1
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6429552..6431105
- synteny block?: BlockID0050950
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2591 (asp1)
08BA02176:
C248_2720
11819-97:
MS7_2657 (asp1)
6850:
RSAU_002495 (asp1)
71193:
ST398NM01_2702
ECT-R 2:
ECTR2_2506
ED133:
SAOV_2703c
ED98:
—
HO 5096 0412:
SAEMRSA15_25570
JH1:
SaurJH1_2732
JH9:
SaurJH9_2676
JKD6008:
SAA6008_02711
JKD6159:
SAA6159_02548
LGA251:
SARLGA251_24240
M013:
M013TW_2633
MRSA252:
SAR2731
MSHR1132:
SAMSHR1132_24760
MSSA476:
SAS2538
Mu3:
SAHV_2636
Mu50:
SAV2652
MW2:
MW2573
RF122:
SAB2527c
ST398:
SAPIG2702
T0131:
SAT0131_02921
TCH60:
HMPREF0772_10535 (asp1)
TW20:
SATW20_27900
USA300_TCH1516:
USA300HOU_2652
VC40:
SAVC_12140
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKYFIPAWYDDQRWWQDTTVPYYQLQNKTEFDDMISLMGMHLENDLDYQLIVLNHAPNLR
N315 MKYFIPAWYDDQRWWQDTTVPYYQLQNKTEFDDMISLMGMHLENDLDYQLIVLNHAPNLR
NCTC8325 MKYFIPAWYDDQRWWQDTTVPYYQLQNKTEFDDMISLMGMHLENDLDYQLIVLNHAPNLR
Newman MKYFIPAWYDDQRWWQDTTVPYYQLQNKTEFDDMISLMGMHLENDLDYQLIVLNHAPNLR
USA300_FPR3757 MKYFIPAWYDDQRWWQDTTVPYYQLQNKTEFDDMISLMGMHLENDLDYQLIVLNHAPNLR
************************************************************
COL TFLHRYDLYETKYSSVFDEIQGFSHHAPQAINYHHLKWPDDVEFVYTPYLLKCVTSEQTY
N315 TFLHRYDLYETKYSSVFDEIQGFSHHAPQAINYHHLKWPDDVEFVYTPYLLKCVTSEQTY
NCTC8325 TFLHRYDLYETKYSSVFDEIQGFSHHAPQAINYHHLKWPDDVEFVYTPYLLKCVTSEQTY
Newman TFLHRYDLYETKYSSVFDEIQGFSHHAPQAINYHHLKWPDDVEFVYTPYLLKCVTSEQTY
USA300_FPR3757 TFLHRYDLYETKYSSVFDEIQGFSHHAPQAINYHHLKWPDDVEFVYTPYLLKCVTSEQTY
************************************************************
COL TNIYFSQEGYSIWFEEFERDQLQRRYIFDDRGYLSAIRYFDDQGEASYQEYLTINGDCVL
N315 TNIYFSQEGYSIWFEEFERDQLQRRYIFDDRGYLSAIRYFDDQGEASYQQYLTINGDCVL
NCTC8325 TNIYFSQEGYSIWFEEFERDQLQRRYIFDDRGYLSAIRYFDDQGEASYQEYLTINGDCVL
Newman TNIYFSQEGYSIWFEEFERDQLQRRYIFDDRGYLSAIRYFDDQGEASYQEYLTINGDCVL
USA300_FPR3757 TNIYFSQEGYSIWFEEFERDQLQRRYIFDDRGYLSAIRYFDDQGEASYQEYLTINGDCVL
*************************************************:**********
COL HEDLKNGRVTVSKRYQHHYQQTEYNNMAQLIEEKFQAMIAQQIHEDDHVIVASDARHNRQ
N315 HEDLKNGRVTVSKRYQHHYQQTEYNNMAQLIEEKFQAMIAQQIHEDDHVIVASDARHNRQ
NCTC8325 HEDLKNGRVTVSKRYQHHYQQTEYNNMAQLIEEKFQAMIAQQIHEDDHVIVASDARHNRQ
Newman HEDLKNGRVTVSKRYQHHYQQTEYNNMAQLIEEKFQAMIAQQIHEDDHVIVASDARHNRQ
USA300_FPR3757 HEDLKNGRVTVSKRYQHHYQQTEYNNMAQLIEEKFQAMIAQQIHEDDHVIVASDARHNRQ
************************************************************
COL IANHIPAKSLSYSFFKNRNETVSDEEYQSIVKNAHLIVDSVQLERDLISHQEKYQRENTM
N315 IANHIPAKLLSYSFFKNRNETVSDEEYQSIVKNAHLIVDSMQLERDLISHQEKYQRENTM
NCTC8325 IANHIPAKSLSYSFFKNRNETVSDEEYQSIVKNAHLIVDSVQLERDLISHQEKYQRENTM
Newman IANHIPAKSLSYSFFKNRNETVSDEEYQSIVKNAHLIVDSVQLERDLISHQEKYQRENTM
USA300_FPR3757 IANHIPAKSLSYSFFKNRNETVSDEEYQSIVKNAHLIVDSVQLERDLISHQEKYQRENTM
******** *******************************:*******************
COL IRITPFETRQSPNISSQLMETFIGVWIDGMSDADLQQMMQRLVDYIAQEDYYRLILLSRH
N315 IRITPFETRQSPNISSQLMETFIGVWIDGMSDADLQQMMQRLVDYIAQEDYYRLILLSRH
NCTC8325 IRITPFETRQSPNISSQLMETFIGVWIDGMSDADLQQMMQRLVDYIAQEDYYRLILLSRH
Newman IRITPFETRQSPNISSQLMETFIGVWIDGMSDADLQQMMQRLVDYIAQEDYYRLILLSRH
USA300_FPR3757 IRITPFETRQSPNISSQLMETFIGVWIDGMSDADLQQMMQRLVDYIAQEDYYRLILLSRH
************************************************************
COL QNDIPMWLRECITSVNEEYQAKQNADVNVSALMTPEDQDDIIAVKTIHAEHDVVEALRTL
N315 QNDIPMWLRECITSVNEEYQAKQNADVNVSALMTPEDQDDIIAVKTIHAEHDVVEALRTL
NCTC8325 QNDIPMWLRECITSVNEEYQAKQNADVNVSALMTPEDQDDIIAVKTIHAEHDVVEALRTL
Newman QNDIPMWLRECITSVNEEYQAKQNADVNVSALMTPEDQDDIIAVKTIHAEHDVVEALRTL
USA300_FPR3757 QNDIPMWLRECITSVNEEYQAKQNADVNVSALMTPEDQDDIIAVKTIHAEHDVVEALRTL
************************************************************
COL RLVIDMSKEPDLYLQISAISAGIPQINGQQTDYVSDYDNGRIINTVDELDDALNYYLFYL
N315 RLVIDMSKEPDLYLQISAISAGIPQINGQQTDYVSDYDNGRIINTVDELDDALNYYLFYL
NCTC8325 RLVIDMSKEPDLYLQISAISAGIPQINGQQTDYVSDYDNGRIINTVDELDDALNYYLFYL
Newman RLVIDMSKEPDLYLQISAISAGIPQINGQQTDYVSDYDNGRIINTVDELDDALNYYLFYL
USA300_FPR3757 RLVIDMSKEPDLYLQISAISAGIPQINGQQTDYVSDYDNGRIINTVDELDDALNYYLFYL
************************************************************
COL KNWNYAYAYSLKLIDAYASKNIINQLDELIEGENDAT
N315 KNWNYAYAYSLKLIDAYASKNIINQLDELIEGENDAT
NCTC8325 KNWNYAYAYSLKLIDAYASKNIINQLDELIEGENDAT
Newman KNWNYAYAYSLKLIDAYASKNIINQLDELIEGENDAT
USA300_FPR3757 KNWNYAYAYSLKLIDAYASKNIINQLDELIEGENDAT
*************************************