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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006412000
- symbol?: icaD
- synonym:
- description?: poly-beta-1,6-N-acetyl-D-glucosamine synthesis protein IcaD
- poly-beta-1,6-N-acetyl-D-glucosamine synthesis protein IcaD
- intercellular adhesion protein D
- intercellular adhesion protein IcaD
- Polysaccharide intercellular adhesin (PIA)biosynthesis protein IcaD
- intracellular adhesion protein D
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 6462636..6462922
- synteny block?: BlockID0051190
- occurrence?: in 76% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2606 (icaD)
08BA02176:
—
11819-97:
MS7_2672 (icaD)
6850:
—
71193:
—
ECT-R 2:
—
ED133:
SAOV_2719
ED98:
SAAV_2739 (icaD)
HO 5096 0412:
SAEMRSA15_25740 (icaD)
JH1:
SaurJH1_2748
JH9:
SaurJH9_2691
JKD6008:
—
JKD6159:
SAA6159_02563 (icaD)
LGA251:
SARLGA251_24410 (icaD)
M013:
M013TW_2650
MRSA252:
SAR2748 (icaD)
MSHR1132:
SAMSHR1132_24950
MSSA476:
SAS2553
Mu3:
SAHV_2651 (icaD)
Mu50:
SAV2667 (icaD)
MW2:
MW2587 (icaD)
RF122:
SAB2542 (icaD)
ST398:
—
T0131:
—
TCH60:
HMPREF0772_10519 (icaD)
TW20:
SATW20_28050 (icaD)
USA300_TCH1516:
USA300HOU_2667 (icaD)
VC40:
SAVC_12215
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MVKPRQREYPTLKSSLNIVRETALIAISCVFWIYCLVVLLVYIGTIFEIHDESINTIRVA
N315 MVKPRQREYPTLKSSLNIVRETALIAISCVFWIYCLVVLLVYIGTIFEIHDESINTIRVA
NCTC8325 MVKPRQREYPTLKSSLNIVRETALIAISCVFWIYCLVVLLVYIGTIFEIHDESINTIRVA
Newman MVKPRQREYPTLKSSLNIVRETALIAISCVFWIYCLVVLLVYIGTIFEIHDESINTIRVA
************************************************************
COL LNIENTEILDIFETMGIFAIIIFVFFTISILIQKWQRGRES
N315 LNIENTEILDIFETMGIFAIIIFVFFTISILIQKWQRGRES
NCTC8325 LNIENTEILDIFETMGIFAIIIFVFFTISILIQKWQRGRES
Newman LNIENTEILDIFETMGIFAIIIFVFFTISILIQKWQRGRES
*****************************************