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Summary[edit source | edit]

  • pan ID?: SAUPAN006420000
  • symbol?: lip
  • description?: triacylglycerol lipase

      descriptions from strain specific annotations:

    • triacylglycerol lipase
    • triacylglycerol lipase precursor
    • lipase 2 (Glycerol ester hydrolase 2)
    • Lipase
    • lipase 1
  • strand?: -
  • coordinates?: 6465481..6467523
  • synteny block?: BlockID0051270
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL2694 (geh)
    N315:
    SA2463 (lip)
    NCTC8325:
    Newman:
    NWMN_2569 (lip)
    USA300_FPR3757:
    04-02981:
    SA2981_2610 (lip)
    08BA02176:
    C248_2739 (lip)
    11819-97:
    MS7_2675 (lip)
    71193:
    ST398NM01_2721
    ECT-R 2:
    ECTR2_2523
    ED133:
    SAOV_2721c
    ED98:
    SAAV_2743
    HO 5096 0412:
    SAEMRSA15_25770 (lip)
    JH1:
    SaurJH1_2751
    JH9:
    SaurJH9_2694
    JKD6008:
    SAA6008_02729 (lip)
    JKD6159:
    SAA6159_02566 (lip)
    LGA251:
    SARLGA251_24440 (lip)
    M013:
    M013TW_2653
    MRSA252:
    SAR2753 (lip)
    MSHR1132:
    SAMSHR1132_24980
    MSSA476:
    SAS2556
    Mu3:
    SAHV_2655 (lip)
    Mu50:
    SAV2671 (lip)
    MW2:
    MW2590 (lip)
    RF122:
    SAB2546c (lip)
    ST398:
    SAPIG2721
    T0131:
    SAT0131_02948
    TCH60:
    HMPREF0772_10515 (lip1)
    TW20:
    SATW20_28080 (lip)
    USA300_TCH1516:
    USA300HOU_2671 (lip)
    VC40:
    SAVC_12230

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             -MKSQNKYSIRKFSVGASSILIATLLFLSGGQAQAAEKQVNMGNSQEDTVTAQSIGDQQT
    N315            MMKSQNKYSIRKFSVGASSILIATLLFLSGGQAQAAEKQVNMGNSQEDTVTAQSIGDQQT
    NCTC8325        -MKSQNKYSIRKFSVGASSILIATLLFLSGGQAQAAEKQVNMGNSQEDTVTAQSIGDQQT
    Newman          -MKSQNKYSIRKFSVGASSILIATLLFLSGGQAQAAEKQVNMGNSQEDTVTAQSIGDQQT
    USA300_FPR3757  -MKSQNKYSIRKFSVGASSILIATLLFLSGGQAQAAEKQVNMGNSQEDTVTAQSIGDQQT
                     ***********************************************************

    COL             RENANYQRENGVDEQQHTENLTKNLHNDKTISEENHRKTDDLNKDQLKDDKKSSLNNKNI
    N315            RENANYQRENGVDEQQHTENLTKNLHNDKTISEENHRKTDDLNKDQLKDDKNSSLNNKNI
    NCTC8325        RENANYQRENGVDEQQHTENLTKNLHNDKTISEENHRKTDDLNKDQLKDDKKSSLNNKNI
    Newman          RENANYQRENGVDEQQHTENLTKNLHNDKTISEENHRKTDDLNKDQLKDDKKSSLNNKNI
    USA300_FPR3757  RENANYQRENGVDEQQHTENLTKNLHNDKTISEENHRKTDDLNKDQLKDDKKSSLNNKNI
                    ***************************************************:********

    COL             QRDTTKNNNANPSDVNQGLEQAINDGKQSKVASQQQSKEADNSQDSNANNNLPSQSRIKE
    N315            QRDTTKNNNANPSDVNQGLEQAINDGKQSKVASQQQSKEVDNSQDSNANNNLPSQSLTKE
    NCTC8325        QRDTTKNNNANPSDVNQGLEQAINDGKQSKVASQQQSKEADNSQDSNANNNLPSQSRIKE
    Newman          QRDTTKNNNANPSDVNQGLEQAINDGKQSKVASQQQSKEADNSQDSNANNNLPSQSRIKE
    USA300_FPR3757  QRDTTKNNNANPSDVNQGLEQAINDGKQSKVASQQQSKEADNSQDSNANNNLPSQSRIKE
                    ***************************************.****************  **

    COL             APSLNKLDQTSQREIVNETEIEKVQPQQNNQANDKITNYNFNNEQEVKPQKDEKTLSVSD
    N315            APSLNKSDQTSQREIVNETEIEKVQPQQNNQANDKITNHNFNNEQEVKPQKDEKTLSVSD
    NCTC8325        APSLNKLDQTSQREIVNETEIEKVQPQQNNQANDKITNYNFNNEQEVKPQKDEKTLSVSD
    Newman          APSLNKLDQTSQREIVNETEIEKVQPQQNNQANDKITNYNFNNEQEVKPQKDEKTLSVSD
    USA300_FPR3757  APSLNKLDQTSQREIVNETEIEKVQPQQNNQANDKITNYNFNNEQEVKPQKDEKTLSVSD
                    ****** *******************************:*********************

    COL             LKNNQKSPVEPTKDNDKKNGLNLLKSSAVATLPNKGTKELTAKAKDDQTNKVAKQGQYKN
    N315            LKNNQKSPVEPTKDNDKKNGLNLLKSSAVATLPNKGTKELTAKAKDDQTNKVAKQGQYKN
    NCTC8325        LKNNQKSPVEPTKDNDKKNGLNLLKSSAVATLPNKGTKELTAKAKDDQTNKVAKQGQYKN
    Newman          LKNNQKSPVEPTKDNDKKNGLNLLKSSAVATLPNKGTKELTAKAKDDQTNKVAKQGQYKN
    USA300_FPR3757  LKNNQKSPVEPTKDNDKKNGLNLLKSSAVATLPNKGTKELTAKAKDDQTNKVAKQGQYKN
                    ************************************************************

    COL             QDPIVLVHGFNGFTDDINPSVLAHYWGGNKMNIRQDLEENGYKAYEASISAFGSNYDRAV
    N315            QDPIVLVHGFNGFTDDINPSVLAHYWGGNKMNIRQDLEENGYKAYEASISAFGSNYDRAV
    NCTC8325        QDPIVLVHGFNGFTDDINPSVLAHYWGGNKMNIRQDLEENGYKAYEASISAFGSNYDRAV
    Newman          QDPIVLVHGFNGFTDDINPSVLAHYWGGNKMNIRQDLEENGYKAYEASISAFGSNYDRAV
    USA300_FPR3757  QDPIVLVHGFNGFTDDINPSVLAHYWGGNKMNIRQDLEENGYKAYEASISAFGSNYDRAV
                    ************************************************************

    COL             ELYYYIKGGRVDYGAAHAAKYGHERYGKTYEGIYKDWKPGQKVHLVGHSMGGQTIRQLEE
    N315            ELYYYIKGGRVDYGAAHAAKYGHERYGKTYEGIYKDWKPGQKVHLVGHSMGGQTIRQLEE
    NCTC8325        ELYYYIKGGRVDYGAAHAAKYGHERYGKTYEGIYKDWKPGQKVHLVGHSMGGQTIRQLEE
    Newman          ELYYYIKGGRVDYGAAHAAKYGHERYGKTYEGIYKDWKPGQKVHLVGHSMGGQTIRQLEE
    USA300_FPR3757  ELYYYIKGGRVDYGAAHAAKYGHERYGKTYEGIYKDWKPGQKVHLVGHSMGGQTIRQLEE
                    ************************************************************

    COL             LLRNGNREEIEYQKKHGGEISPLFKGNHDNMISSITTLGTPHNGTHASDLAGNEALVRQI
    N315            LLRNGNREEIEYQKKHGGEISPLFKGNNDNMISSITTLGTPHNGTHASDLAGNEALVRQI
    NCTC8325        LLRNGNREEIEYQKKHGGEISPLFKGNHDNMISSITTLGTPHNGTHASDLAGNEALVRQI
    Newman          LLRNGNREEIEYQKKHGGEISPLFKGNHDNMISSITTLGTPHNGTHASDLAGNEALVRQI
    USA300_FPR3757  LLRNGNREEIEYQKKHGGEISPLFKGNHDNMISSITTLGTPHNGTHASDLAGNEALVRQI
                    ***************************:********************************

    COL             VFDIGKMFGNKNSRVDFGLAQWGLKQKPNESYIDYVKRVKQSNLWKSKDNGFYDLTREGA
    N315            VFDIGKMFGNKNSRVDFGLAQWGLKQKPNESYIDYVKRVKQSNLWKSKDNGFYDLTREGA
    NCTC8325        VFDIGKMFGNKNSRVDFGLAQWGLKQKPNESYIDYVKRVKQSNLWKSKDNGFYDLTREGA
    Newman          VFDIGKMFGNKNSRVDFGLAQWGLKQKPNESYIDYVKRVKQSNLWKSKDNGFYDLTREGA
    USA300_FPR3757  VFDIGKMFGNKNSRVDFGLAQWGLKQKPNESYIDYVKRVKQSNLWKSKDNGFYDLTREGA
                    ************************************************************

    COL             TDLNRKTSLNPNIVYKTYTGEATHKALNSDRQKADLNMFFPFVITGNLIGKATEKEWREN
    N315            TDLNRKTSLNPNIVYKTYTGEATHKALNSDRQKADLNMFFPFVITGNLIGKATEKEWREN
    NCTC8325        TDLNRKTSLNPNIVYKTYTGEATHKALNSDRQKADLNMFFPFVITGNLIGKATEKEWREN
    Newman          TDLNRKTSLNPNIVYKTYTGEATHKALNSDRQKADLNMFFPFVITGNLIGKATEKEWREN
    USA300_FPR3757  TDLNRKTSLNPNIVYKTYTGEATHKALNSDRQKADLNMFFPFVITGNLIGKATEKEWREN
                    ************************************************************

    COL             DGLVSVISSQHPFNQAYTKATDKIQKGIWQVTPTKHDWDHVDFVGQDSSDTVRTREELQD
    N315            DGLVSVISSQHPFNQAYTNATDKIQKGIWQVTPTKHDWDHVDFVGQDSSDTVRTREELQD
    NCTC8325        DGLVSVISSQHPFNQAYTKATDKIQKGIWQVTPTKHDWDHVDFVGQDSSDTVRTREELQD
    Newman          DGLVSVISSQHPFNQAYTKATDKIQKGIWQVTPTKHDWDHVDFVGQDSSDTVRTREELQD
    USA300_FPR3757  DGLVSVISSQHPFNQAYTKATDKIQKGIWQVTPTKHDWDHVDFVGQDSSDTVRTREELQD
                    ******************:*****************************************

    COL             FWHHLADDLVKTEKLTDTKQA
    N315            FWHHLADDLVKTEKVTDTKQA
    NCTC8325        FWHHLADDLVKTEKLTDTKQA
    Newman          FWHHLADDLVKTEKLTDTKQA
    USA300_FPR3757  FWHHLADDLVKTEKLTDTKQA
                    **************:******