NCBI: 10-JUN-2013
Contents
⊟Summary[edit source | edit]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_1197 [new locus tag: SAUSA300_RS06465 ]
- pan locus tag?: SAUPAN003622000
- symbol: SAUSA300_1197
- pan gene symbol?: bsaA
- synonym:
- product: glutathione peroxidase
⊟Genome View[edit source | edit]
⊟Gene[edit source | edit]
⊟General[edit source | edit]
- type: CDS
- locus tag: SAUSA300_1197 [new locus tag: SAUSA300_RS06465 ]
- symbol: SAUSA300_1197
- product: glutathione peroxidase
- replicon: chromosome
- strand: -
- coordinates: 1319065..1319541
- length: 477
- essential: unknown other strains
⊟Accession numbers[edit source | edit]
- Gene ID: 3915120 NCBI
- RefSeq: YP_493894 NCBI
- MicrobesOnline: 1292712 MicrobesOnline
⊟Phenotype[edit source | edit]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit source | edit]
- 1
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421ATGGAGACAATTTATGATTTTGTAGTAGAAACAAATAAAGGTGTTACTTACAAATTAGAT
GCATATAAGGGTGACGTTATGCTAATTGTTAATACAGCTAGCGAATGTGGCTTTACTTCA
CAATTTGAAGGTTTGCAATCATTATACGAGAAATACAAAGATCAAGGGTTTGTAATTCTA
GGTTTCCCTTGTAATCAATTTGGTGGCCAAGAACCTGGTTCAGGCGAAGAAGCAGCTCAA
AACTGTAAATTAAACTATGGTGTTACCTTCCCTATGCATCAAAAAATAGACGTAAAAGGG
GAACATCAATTACCTTTATTTAGATATTTGACTGCGGCACAACACGGATTCTTTAATGAG
AAAATCAAATGGAATTTCACTAAGTTTTTAGTGGATCGCGAAGGTAACGTTGTTAAACGA
TTTGCACCTCAAAAAAAACCTGTTCAAATCGAAAGAGAAATAGAAAAATTATTATAA60
120
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477
⊟Protein[edit source | edit]
⊟General[edit source | edit]
- locus tag: SAUSA300_1197 [new locus tag: SAUSA300_RS06465 ]
- symbol: SAUSA300_1197
- description: glutathione peroxidase
- length: 158
- theoretical pI: 6.77696
- theoretical MW: 18117.6
- GRAVY: -0.423418
⊟Function[edit source | edit]
- reaction:
- TIGRFAM: putative glutathione peroxidase Gpx7 (TIGR02540; EC 1.11.1.9; HMM-score: 131.3)
- TheSEED:
- PFAM: Thioredoxin (CL0172) GSHPx; Glutathione peroxidase (PF00255; HMM-score: 131.5)AhpC-TSA; AhpC/TSA family (PF00578; HMM-score: 25.7)Redoxin; Redoxin (PF08534; HMM-score: 19.1)
⊟Structure, modifications & interactions[edit source | edit]
- domains:
- modifications:
- cofactors:
- effectors:
- protein partners:
⊟Localization[edit source | edit]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP: Intracellular
- Prediction by SwissProt Classification: Cytoplasmic
- Pathway Prediction: No pathway
- Intracellular Possibility: 1
- Signal Peptide Possibility: -1
- N-terminally Anchored Score: 1
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- Ymax: 0.125
- Ymax_pos: 43
- Cmax: 0.12
- Cmax_pos: 43
- Smax: 0.165
- Smax_pos: 32
- Smean: 0.093
- D: 0.113
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit source | edit]
⊟Protein sequence[edit source | edit]
- METIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFTSQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL
⊟Experimental data[edit source | edit]
- experimentally validated: no data available
⊟Expression & Regulation[edit source | edit]
⊟Operon[edit source | edit]
- SAUSA300_1197 no polycistronic organisation predicted
⊟Regulation[edit source | edit]
- sigma factor:
- regulator:
⊟Transcription pattern[edit source | edit]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit source | edit]
⊟Protein stability[edit source | edit]
- half-life: no data available
⊟Biological Material[edit source | edit]
⊟Mutants[edit source | edit]
⊟Expression vector[edit source | edit]
⊟lacZ fusion[edit source | edit]
⊟GFP fusion[edit source | edit]
⊟two-hybrid system[edit source | edit]
⊟FLAG-tag construct[edit source | edit]
⊟Antibody[edit source | edit]
⊟Other Information[edit source | edit]
You are kindly invited to share additional interesting facts.
⊟Literature[edit source | edit]
⊟References[edit source | edit]
⊟Relevant publications[edit source | edit]