NCBI: 10-JUN-2013

⊟Summary

• organism: Staphylococcus aureus USA300_FPR3757
• locus tag: SAUSA300_1851 [new locus tag: SAUSA300_RS10115 ]
• pan locus tag^?: SAUPAN004853000
• symbol: SAUSA300_1851
• pan gene symbol^?: —
• synonym:
• product: hypothetical protein

⊟Gene

⊟General

• type: CDS
• locus tag: SAUSA300_1851 [new locus tag: SAUSA300_RS10115 ]
• symbol: SAUSA300_1851
• product: hypothetical protein
• replicon: chromosome
• strand: -
• coordinates: 2013664..2014500
• length: 837
• essential: unknown other strains

⊟Accession numbers

• Gene ID: 3913676 NCBI
• RefSeq: YP_494503 NCBI
• MicrobesOnline: 1293366 MicrobesOnline

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  121
  181
  241
  301
  361
  421
  481
  541
  601
  661
  721
  781
  
  ATGCTAGATAATATTATTTTATATTTTAAAAACTTACCGCATACTAAAAGGTATGTAACA
  GAACGTTTAAAACAAAGTTGGAAAAGTTTTCTAATCGTATTAGCTGCATGTTTAATACTT
  ATTATTGCAAGTGAAACGCTATTTTCCTTTAGTCATTTGACCGATGTTAAAGAGGTGAGA
  TGGTTATTTAGAATCATTGTATTGATTGTTTTTGCGGTAGTGATGTTCACAATTTATATC
  TCTTATCATCATTATATGAATGACTTTTTAGTTACTAAGTTATTTAATATTTCCGCAGCG
  ACGCCAGTAGTTATTATGTCTATTTTAAGTTTTATTATGCTAGTCATTTTGACGATGATT
  AGTGCATTGGTTAAACCAGTAAACTTCGAAACATCATATATAGCGCTATTCTATTTTATT
  GTGATGGCAACTATTTTTGTAGGATTAATATCCGTTACTTTTGGTCTTATTCGACTGTTA
  ACTGAAAAAATAAATATCATATTTTATGGGGTTTGTGTATTGTGTTTCTTATTGTTACCA
  ATTATTTTCATACCAAATCCAAATCATGTATTTATCAATCACATCCTAATGCTAAATCCA
  ATGTATTACATTGTTAATGGTATAGCACAATCTATCATATTTGGTATATCAAGTATGGAA
  AACATTCCATATCATTTTTACTTTATTTTATTCTTATGTTTAATAGCTGCAGTAAATTTC
  GTATTAGCAAGGTATACGACACACGCAATTTATAATAAAACATCTAAAGTGACACAAACT
  GATAATCAACAGGATGTTTCAAATGATAGTACAGACGAGGCGGATACTTCTTCATGA
  60
  120
  180
  240
  300
  360
  420
  480
  540
  600
  660
  720
  780
  837
  

⊟Protein

⊟General

• locus tag: SAUSA300_1851 [new locus tag: SAUSA300_RS10115 ]
• symbol: SAUSA300_1851
• description: hypothetical protein
• length: 278
• theoretical pI: 7.9856
• theoretical MW: 31955
• GRAVY: 0.889928

⊟Function

• reaction:
• TIGRFAM:
  TIGR03943 family protein (TIGR03943; HMM-score: 3.4)
• TheSEED:  
  Cell Wall and CapsuleGram-Positive cell wall componentsTeichoic and lipoteichoic acids biosynthesis Teichoic acid translocation permease protein TagG 
  and 1 more
  CBSS-176280.1.peg.1561 Teichoic acid translocation permease protein TagG 
• PFAM:
  no clan definedDUF2615; Protein of unknown function (DUF2615) (PF11027; HMM-score: 8.4)
  ABC-2 (CL0181) ABC2_membrane; ABC-2 type transporter (PF01061; HMM-score: 7.8)
  no clan definedDUF4131; Domain of unknown function (DUF4131) (PF13567; HMM-score: 7.4)

⊟Structure, modifications & interactions

• domains:
• modifications:
• cofactors:
• effectors:
• protein partners:

⊟Localization

• PSORTb: Cytoplasmic Membrane
  • Cytoplasmic Score: 0
  • Cytoplasmic Membrane Score: 10
  • Cellwall Score: 0
  • Extracellular Score: 0
  • Internal Helices: 6
• LocateP: Multi-transmembrane
  • Prediction by SwissProt Classification: Membrane
  • Pathway Prediction: Sec-(SPI)
  • Intracellular Possibility: 0.17
  • Signal Peptide Possibility: 0
  • N-terminally Anchored Score: -1
  • Predicted Cleavage Site: No CleavageSite
• SignalP: no predicted signal peptide
  • Ymax: 0.126
  • Ymax_pos: 34
  • Cmax: 0.126
  • Cmax_pos: 50
  • Smax: 0.229
  • Smax_pos: 28
  • Smean: 0.116
  • D: 0.122
• predicted transmembrane helices (TMHMM): 7

⊟Accession numbers

• GI: 87160274 NCBI
• RefSeq: YP_494503 NCBI
• UniProt: A0A0H2XEQ9 UniProt

⊟Protein sequence

• MLDNIILYFKNLPHTKRYVTERLKQSWKSFLIVLAACLILIIASETLFSFSHLTDVKEVRWLFRIIVLIVFAVVMFTIYISYHHYMNDFLVTKLFNISAATPVVIMSILSFIMLVILTMISALVKPVNFETSYIALFYFIVMATIFVGLISVTFGLIRLLTEKINIIFYGVCVLCFLLLPIIFIPNPNHVFINHILMLNPMYYIVNGIAQSIIFGISSMENIPYHFYFILFLCLIAAVNFVLARYTTHAIYNKTSKVTQTDNQQDVSNDSTDEADTSS

⊟Experimental data

• experimentally validated: no data available

⊟Expression & Regulation

⊟Operon

• MicrobesOnline: SAUSA300_1851 < SAUSA300_1852 < SAUSA300_1853 < recX

⊟Regulation

• sigma factor:
• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: data available for NCTC8325

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Other Information

You are kindly invited to share additional interesting facts.