NCBI: 02-MAR-2017
Contents
⊟Summary[edit source | edit]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS14055 [old locus tag: SAUSA300_2533 ]
- pan locus tag?: SAUPAN006292000
- symbol: SAUSA300_RS14055
- pan gene symbol?: panC
- synonym:
- product: pantoate--beta-alanine ligase
⊟Genome View[edit source | edit]
⊟Gene[edit source | edit]
⊟General[edit source | edit]
- type: CDS
- locus tag: SAUSA300_RS14055 [old locus tag: SAUSA300_2533 ]
- symbol: SAUSA300_RS14055
- product: pantoate--beta-alanine ligase
- replicon: chromosome
- strand: -
- coordinates: 2734055..2734906
- length: 852
- essential: unknown
⊟Accession numbers[edit source | edit]
- Location: NC_007793 (2734055..2734906) NCBI
- MicrobesOnline:
⊟Phenotype[edit source | edit]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit source | edit]
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841ATGACTAAGCTGATTACTACGGTAAAAGAGATGCAACACATTGTTAAAGCAGCCAAACGC
TCAGGCACAACGATTGGTTTTATCCCAACAATGGGTGCCTTACATGATGGACATTTAACG
ATGGTACGCGAATCAGTTAGTACAAATGATATTACAATTGTGAGTGTATTTGTTAATCCA
TTACAATTTGGTCCAAACGAAGATTTCGATGCTTATCCGAGACAAATTGATAAAGATTTA
GAATTAGTATCAGAAGTAGGAGCGGACATTGTTTTTCATCCTGCAGTAGAAGATATGTAT
CCAGGTGAATTAGGTATTGATGTCAAAGTAGGCCCATTAGCTGATGTGTTAGAAGGAGCG
AAGCGTCCAGGGCATTTTGATGGGGTGGTAACAGTAGTTAATAAGCTATTTAATATTGTT
ATGCCGGATTATGCTTATTTTGGTAAAAAAGATGCCCAGCAATTGGCTATTGTCGAGCAA
ATGGTAAAAGACTTCAATCATGCCGTTGAAATTATTGGTATTGATATCGTTCGAGAAGCA
GATGGTTTGGCGAAAAGTTCAAGAAATGTTTATTTAACGGAGCAAGAACGACAAGAAGCG
GTACATTTAAGTAAAAGTTTGCTATTAGCACAAGCGTTGTATCAAGACGGTGAACGTCAA
AGTAAAGTAATTATAGACAGGGTTACTGAATATCTTGAATCACATATAAGTGGACGCATT
GAAGAAGTTGCTGTTTATAGTTATCCTCAATTAGTAGAACAACACGAAATAACTGGACGC
ATATTTATCTCGTTAGCTGTTAAATTTTCAAAAGCGCGTTTAATAGATAATATAATAATT
GGAGCTGAATAA60
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⊟Protein[edit source | edit]
⊟General[edit source | edit]
- locus tag: SAUSA300_RS14055 [old locus tag: SAUSA300_2533 ]
- symbol: SAUSA300_RS14055
- description: pantoate--beta-alanine ligase
- length: 283
- theoretical pI: 4.95781
- theoretical MW: 31461.8
- GRAVY: -0.0208481
⊟Function[edit source | edit]
- reaction: EC 6.3.2.1? ExPASyPantoate--beta-alanine ligase (AMP-forming)ATP + (R)-pantoate + beta-alanine = AMP + diphosphate + (R)-pantothenate
- TIGRFAM: Biosynthesis of cofactors, prosthetic groups, and carriersPantothenate and coenzyme Apantoate--beta-alanine ligase (TIGR00018; EC 6.3.2.1; HMM-score: 345.7)cytidyltransferase-like domain (TIGR00125; HMM-score: 28.1)
- TheSEED:
- PFAM: HUP (CL0039) Pantoate_ligase; Pantoate-beta-alanine ligase (PF02569; HMM-score: 329.1)Pec_lyase-like (CL0268) Haemagg_act; haemagglutination activity domain (PF05860; HMM-score: 12.3)
⊟Structure, modifications & interactions[edit source | edit]
- domains:
- modifications:
- cofactors:
- effectors:
- protein partners:
⊟Localization[edit source | edit]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- Ymax: 0.242
- Ymax_pos: 18
- Cmax: 0.134
- Cmax_pos: 18
- Smax: 0.553
- Smax_pos: 11
- Smean: 0.382
- D: 0.297
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit source | edit]
⊟Protein sequence[edit source | edit]
- MTKLITTVKEMQHIVKAAKRSGTTIGFIPTMGALHDGHLTMVRESVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEVGADIVFHPAVEDMYPGELGIDVKVGPLADVLEGAKRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQLAIVEQMVKDFNHAVEIIGIDIVREADGLAKSSRNVYLTEQERQEAVHLSKSLLLAQALYQDGERQSKVIIDRVTEYLESHISGRIEEVAVYSYPQLVEQHEITGRIFISLAVKFSKARLIDNIIIGAE
⊟Experimental data[edit source | edit]
- experimentally validated: no data available
⊟Expression & Regulation[edit source | edit]
⊟Operon[edit source | edit]
- SAUSA300_RS14055 no polycistronic organisation predicted
⊟Regulation[edit source | edit]
- sigma factor:
- regulator:
⊟Transcription pattern[edit source | edit]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit source | edit]
- Aureolib: no data available
⊟Protein stability[edit source | edit]
- half-life: no data available
⊟Biological Material[edit source | edit]
⊟Mutants[edit source | edit]
⊟Expression vector[edit source | edit]
⊟lacZ fusion[edit source | edit]
⊟GFP fusion[edit source | edit]
⊟two-hybrid system[edit source | edit]
⊟FLAG-tag construct[edit source | edit]
⊟Antibody[edit source | edit]
⊟Other Information[edit source | edit]
You are kindly invited to share additional interesting facts.
⊟Literature[edit source | edit]
⊟References[edit source | edit]
⊟Relevant publications[edit source | edit]