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NCBI: 02-MAR-2017

⊟Summary[edit source | edit]

  • organism: Staphylococcus aureus USA300_FPR3757
  • locus tag: SAUSA300_RS14580 [old locus tag: SAUSA300_2624 ]
  • pan locus tag?: SAUPAN006448000
  • symbol: SAUSA300_RS14580
  • pan gene symbol?: —
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit source | edit]

⊟Gene[edit source | edit]

⊟General[edit source | edit]

  • type: CDS
  • locus tag: SAUSA300_RS14580 [old locus tag: SAUSA300_2624 ]
  • symbol: SAUSA300_RS14580
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 2850774..2851541
  • length: 768
  • essential: unknown

⊟Accession numbers[edit source | edit]

  • Location: NC_007793 (2850774..2851541) NCBI
  • MicrobesOnline:

⊟Phenotype[edit source | edit]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGTTAAGTAAACAATCTCAAGATTTTTTAGAAAAATTACGTGTTGAATTGTTATTTAGA
    GGTAAGACTGAAGCAGAAGTAGAAGAGTTATTGGAAGAGCTCGAAGATCATTTAACTATG
    GCTGAAAAAAATAACGAAGATACAAGTTCAATTATTAATACACCGATTAAGTCAATGGCT
    GATCAATTATCACCTGAGATAAGTCTTACTACCGGTTTGTATAAATATATTACTTTGTAC
    TTCGCTTTTATTTTAGCAGTCATTATAATTCCTAGGTTTTTAGATTTGGGTACATTTGAT
    GTGACAATTGCATTTTTACTTTATATAGCTAGTATCGTTATTTTAGGTGTTGTCATTGGT
    ATGCTGATTCTACGAAATACATTAGTCCGATTTGGTGACCAAAAAATAACGTATGTTATA
    AATGTGACTTATGGAATTATCGTATTTTTATGGATGATTTTAGGTGGCTTGATTATTAAA
    AAATATCCTATCTATAGTTTCTTTGAGTTAAGTGACAAACAGAGTTTCATCGTTGGGTTA
    GTACTTTTAATTGCGCTCATTGGAACTTGTATTTTAATTAAACAGAAAATTTATGCGCTC
    ATCGTGTTGGTAATTTCATTGCCAAGTTTGATAGCAAGGATAGCAGCTATCTTTAGTAAA
    GAACCAGACACTTTTAATTTAGTTTCAGTAAGTATACTCATCATTCTAAATATAGCATTT
    ATTATTTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    768

⊟Protein[edit source | edit]

⊟General[edit source | edit]

  • locus tag: SAUSA300_RS14580 [old locus tag: SAUSA300_2624 ]
  • symbol: SAUSA300_RS14580
  • description: hypothetical protein
  • length: 255
  • theoretical pI: 5.38499
  • theoretical MW: 28915.4
  • GRAVY: 0.792157

⊟Function[edit source | edit]

  • TIGRFAM:
  • TheSEED:
  • PFAM:

⊟Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

⊟Localization[edit source | edit]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 6
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.139
    • Ymax_pos: 12
    • Cmax: 0.163
    • Cmax_pos: 61
    • Smax: 0.277
    • Smax_pos: 3
    • Smean: 0.196
    • D: 0.161
  • predicted transmembrane helices (TMHMM): 6

⊟Accession numbers[edit source | edit]

  • GI: 446872304 NCBI
  • RefSeq: WP_000949560 NCBI
  • UniProt:

⊟Protein sequence[edit source | edit]

  • MLSKQSQDFLEKLRVELLFRGKTEAEVEELLEELEDHLTMAEKNNEDTSSIINTPIKSMADQLSPEISLTTGLYKYITLYFAFILAVIIIPRFLDLGTFDVTIAFLLYIASIVILGVVIGMLILRNTLVRFGDQKITYVINVTYGIIVFLWMILGGLIIKKYPIYSFFELSDKQSFIVGLVLLIALIGTCILIKQKIYALIVLVISLPSLIARIAAIFSKEPDTFNLVSVSILIILNIAFIIYTFVNFRKLKKED

⊟Experimental data[edit source | edit]

  • experimentally validated: no data available

⊟Expression & Regulation[edit source | edit]

⊟Operon[edit source | edit]

  • SAUSA300_RS14580 no polycistronic organisation predicted

⊟Regulation[edit source | edit]

  • sigma factor:
  • regulator:

⊟Transcription pattern[edit source | edit]

⊟Protein synthesis (provided by Aureolib)[edit source | edit]

⊟Protein stability[edit source | edit]

  • half-life: no data available

⊟Biological Material[edit source | edit]

⊟Mutants[edit source | edit]

⊟Expression vector[edit source | edit]

⊟lacZ fusion[edit source | edit]

⊟GFP fusion[edit source | edit]

⊟two-hybrid system[edit source | edit]

⊟FLAG-tag construct[edit source | edit]

⊟Antibody[edit source | edit]

⊟Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

⊟Literature[edit source | edit]

⊟References[edit source | edit]

⊟Relevant publications[edit source | edit]

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