NCBI: 02-MAR-2017
Contents
⊟Summary[edit source | edit]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS14580 [old locus tag: SAUSA300_2624 ]
- pan locus tag?: SAUPAN006448000
- symbol: SAUSA300_RS14580
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit source | edit]
⊟Gene[edit source | edit]
⊟General[edit source | edit]
- type: CDS
- locus tag: SAUSA300_RS14580 [old locus tag: SAUSA300_2624 ]
- symbol: SAUSA300_RS14580
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 2850774..2851541
- length: 768
- essential: unknown
⊟Accession numbers[edit source | edit]
- Location: NC_007793 (2850774..2851541) NCBI
- MicrobesOnline:
⊟Phenotype[edit source | edit]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit source | edit]
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721ATGTTAAGTAAACAATCTCAAGATTTTTTAGAAAAATTACGTGTTGAATTGTTATTTAGA
GGTAAGACTGAAGCAGAAGTAGAAGAGTTATTGGAAGAGCTCGAAGATCATTTAACTATG
GCTGAAAAAAATAACGAAGATACAAGTTCAATTATTAATACACCGATTAAGTCAATGGCT
GATCAATTATCACCTGAGATAAGTCTTACTACCGGTTTGTATAAATATATTACTTTGTAC
TTCGCTTTTATTTTAGCAGTCATTATAATTCCTAGGTTTTTAGATTTGGGTACATTTGAT
GTGACAATTGCATTTTTACTTTATATAGCTAGTATCGTTATTTTAGGTGTTGTCATTGGT
ATGCTGATTCTACGAAATACATTAGTCCGATTTGGTGACCAAAAAATAACGTATGTTATA
AATGTGACTTATGGAATTATCGTATTTTTATGGATGATTTTAGGTGGCTTGATTATTAAA
AAATATCCTATCTATAGTTTCTTTGAGTTAAGTGACAAACAGAGTTTCATCGTTGGGTTA
GTACTTTTAATTGCGCTCATTGGAACTTGTATTTTAATTAAACAGAAAATTTATGCGCTC
ATCGTGTTGGTAATTTCATTGCCAAGTTTGATAGCAAGGATAGCAGCTATCTTTAGTAAA
GAACCAGACACTTTTAATTTAGTTTCAGTAAGTATACTCATCATTCTAAATATAGCATTT
ATTATTTATACATTTGTAAATTTTAGGAAGTTAAAAAAAGAAGACTAA60
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⊟Protein[edit source | edit]
⊟General[edit source | edit]
- locus tag: SAUSA300_RS14580 [old locus tag: SAUSA300_2624 ]
- symbol: SAUSA300_RS14580
- description: hypothetical protein
- length: 255
- theoretical pI: 5.38499
- theoretical MW: 28915.4
- GRAVY: 0.792157
⊟Function[edit source | edit]
- reaction:
- TIGRFAM:
- TheSEED:
- PFAM:
⊟Structure, modifications & interactions[edit source | edit]
- domains:
- modifications:
- cofactors:
- effectors:
- protein partners:
⊟Localization[edit source | edit]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 6
- LocateP:
- SignalP: no predicted signal peptide
- Ymax: 0.139
- Ymax_pos: 12
- Cmax: 0.163
- Cmax_pos: 61
- Smax: 0.277
- Smax_pos: 3
- Smean: 0.196
- D: 0.161
- predicted transmembrane helices (TMHMM): 6
⊟Accession numbers[edit source | edit]
⊟Protein sequence[edit source | edit]
- MLSKQSQDFLEKLRVELLFRGKTEAEVEELLEELEDHLTMAEKNNEDTSSIINTPIKSMADQLSPEISLTTGLYKYITLYFAFILAVIIIPRFLDLGTFDVTIAFLLYIASIVILGVVIGMLILRNTLVRFGDQKITYVINVTYGIIVFLWMILGGLIIKKYPIYSFFELSDKQSFIVGLVLLIALIGTCILIKQKIYALIVLVISLPSLIARIAAIFSKEPDTFNLVSVSILIILNIAFIIYTFVNFRKLKKED
⊟Experimental data[edit source | edit]
- experimentally validated: no data available
⊟Expression & Regulation[edit source | edit]
⊟Operon[edit source | edit]
- SAUSA300_RS14580 no polycistronic organisation predicted
⊟Regulation[edit source | edit]
- sigma factor:
- regulator:
⊟Transcription pattern[edit source | edit]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit source | edit]
- Aureolib: no data available
⊟Protein stability[edit source | edit]
- half-life: no data available
⊟Biological Material[edit source | edit]
⊟Mutants[edit source | edit]
⊟Expression vector[edit source | edit]
⊟lacZ fusion[edit source | edit]
⊟GFP fusion[edit source | edit]
⊟two-hybrid system[edit source | edit]
⊟FLAG-tag construct[edit source | edit]
⊟Antibody[edit source | edit]
⊟Other Information[edit source | edit]
You are kindly invited to share additional interesting facts.
⊟Literature[edit source | edit]
⊟References[edit source | edit]
⊟Relevant publications[edit source | edit]