NCBI: 02-MAR-2017
Contents
⊟Summary[edit source | edit]
- organism: Staphylococcus aureus N315
- locus tag: SA_RS04305 [old locus tag: SA0755 ]
- pan locus tag?: SAUPAN002816000
- symbol: SA_RS04305
- pan gene symbol?: ohr
- synonym:
- product: organic hydroperoxide reductase OsmC/OhrA
⊟Genome View[edit source | edit]
⊟Gene[edit source | edit]
⊟General[edit source | edit]
- type: CDS
- locus tag: SA_RS04305 [old locus tag: SA0755 ]
- symbol: SA_RS04305
- product: organic hydroperoxide reductase OsmC/OhrA
- replicon: chromosome
- strand: -
- coordinates: 862690..863112
- length: 423
- essential: unknown
⊟Accession numbers[edit source | edit]
- Location: NC_002745 (862690..863112) NCBI
- MicrobesOnline:
⊟Phenotype[edit source | edit]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit source | edit]
- 1
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421ATGGCAATACATTATGAAACTAAAGCGACGAATGTTGGCGGACGTAAAGGACATGTTTAT
ACTGATGATCGAGCGTTAGATATTGATATCGTTCCGCCTGCTCAAGCAGATGGTAAAGCT
ACTAACCCCGAACAATTATTTGCAGCAGGTTATGCATCTTGCTTCAACGGTGCTTTCGAC
CTAATTTTAAAGCAAAACAAAGTGCGTGATGCTCATCCAGAAGTAACACTAACAGTGAGA
CTAGAAGATGATTCAGACTCAGAAAGTCCTAAATTAAGTGTTTCAATTGATGCGACAATT
AAAAATGTTATATCTCAAGAAGAAGCTGAAAAATATTTACAAATGGCTCATGAATTTTGT
CCATATTCAAAAGCGACTCAAGGAAATATTAATGTCGATTTAAATGTAAATGTTGTAGAT
TAG60
120
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420
423
⊟Protein[edit source | edit]
⊟General[edit source | edit]
- locus tag: SA_RS04305 [old locus tag: SA0755 ]
- symbol: SA_RS04305
- description: organic hydroperoxide reductase OsmC/OhrA
- length: 140
- theoretical pI: 4.52657
- theoretical MW: 15339
- GRAVY: -0.419286
⊟Function[edit source | edit]
- reaction:
- TIGRFAM: Cellular processesDetoxificationperoxiredoxin, Ohr subfamily (TIGR03561; HMM-score: 153)Cellular processesDetoxificationperoxiredoxin, OsmC subfamily (TIGR03562; HMM-score: 52.7)peroxiredoxin, SACOL1771 subfamily (TIGR03563; HMM-score: 29)
- TheSEED:
- PFAM: no clan definedOsmC; OsmC-like protein (PF02566; HMM-score: 65.1)
⊟Structure, modifications & interactions[edit source | edit]
- domains:
- modifications:
- cofactors:
- effectors:
- protein partners:
⊟Localization[edit source | edit]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- Ymax: 0.135
- Ymax_pos: 37
- Cmax: 0.222
- Cmax_pos: 37
- Smax: 0.162
- Smax_pos: 2
- Smean: 0.075
- D: 0.111
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit source | edit]
⊟Protein sequence[edit source | edit]
- MAIHYETKATNVGGRKGHVYTDDRALDIDIVPPAQADGKATNPEQLFAAGYASCFNGAFDLILKQNKVRDAHPEVTLTVRLEDDSDSESPKLSVSIDATIKNVISQEEAEKYLQMAHEFCPYSKATQGNINVDLNVNVVD
⊟Experimental data[edit source | edit]
- experimentally validated: no data available
⊟Expression & Regulation[edit source | edit]
⊟Operon[edit source | edit]
- SA_RS04305 no polycistronic organisation predicted
⊟Regulation[edit source | edit]
- sigma factor:
- regulator:
⊟Transcription pattern[edit source | edit]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit source | edit]
- Aureolib: no data available
⊟Protein stability[edit source | edit]
- half-life: no data available
⊟Biological Material[edit source | edit]
⊟Mutants[edit source | edit]
⊟Expression vector[edit source | edit]
⊟lacZ fusion[edit source | edit]
⊟GFP fusion[edit source | edit]
⊟two-hybrid system[edit source | edit]
⊟FLAG-tag construct[edit source | edit]
⊟Antibody[edit source | edit]
⊟Other Information[edit source | edit]
You are kindly invited to share additional interesting facts.
⊟Literature[edit source | edit]
⊟References[edit source | edit]
⊟Relevant publications[edit source | edit]