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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS04505 [old locus tag: SA0789 ]
  • pan locus tag?: SAUPAN003026000
  • symbol: SA_RS04505
  • pan gene symbol?:
  • synonym:
  • product: DUF86 domain-containing protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SA_RS04505 [old locus tag: SA0789 ]
  • symbol: SA_RS04505
  • product: DUF86 domain-containing protein
  • replicon: chromosome
  • strand: +
  • coordinates: 895663..896097
  • length: 435
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002745 (895663..896097) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    ATGTATTTTGTAGACAAAGATAAACTAACTCAGAAATTAGCCTATTTACAAGCATTAACT
    GATGATTATCATGAGAGCAAGCACAATCATTATGCATTTGAACGCATTGCTCAAATGTTG
    ATAGAATCATCGGTAGATATAGGGAATATGATTATCGATGCATTTATTTTAAGGGATCCT
    GGTAATTATAAAGATGTGATTGATATATTAGAACTAGAAAATGTTATTACTAAAGAAACA
    CAGCAGGAGATTAATAAAACTGTCGATATTCGTAAACAATTTACATATGATTACACAGCC
    TTAGATATTAAGGTTATCATGCCAATGTTTGATGACGCATTACCTTATTACAAACAATTT
    ATTACAGAAGTAACGATATTTTTACATCAAGAAAATGTACCAGTAACAGCTTTTGGTAAA
    GGAGAAAATCAATAA
    60
    120
    180
    240
    300
    360
    420
    435

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SA_RS04505 [old locus tag: SA0789 ]
  • symbol: SA_RS04505
  • description: DUF86 domain-containing protein
  • length: 144
  • theoretical pI: 4.47385
  • theoretical MW: 16893.1
  • GRAVY: -0.311806

Function[edit source | edit]

  • TIGRFAM:
    Hypothetical proteinsConservedTIGR00162 family protein (TIGR00162; HMM-score: 12.5)
  • TheSEED:
  • PFAM:
    KNTase_C (CL0291) DUF86; Protein of unknown function DUF86 (PF01934; HMM-score: 57.6)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.099
    • Ymax_pos: 27
    • Cmax: 0.111
    • Cmax_pos: 33
    • Smax: 0.133
    • Smax_pos: 23
    • Smean: 0.084
    • D: 0.093
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI: 446196127 NCBI
  • RefSeq: WP_000273982 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MYFVDKDKLTQKLAYLQALTDDYHESKHNHYAFERIAQMLIESSVDIGNMIIDAFILRDPGNYKDVIDILELENVITKETQQEINKTVDIRKQFTYDYTALDIKVIMPMFDDALPYYKQFITEVTIFLHQENVPVTAFGKGENQ

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SA_RS04505 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]