NCBI: 02-MAR-2017
Contents
⊟Summary[edit source | edit]
- organism: Staphylococcus aureus N315
- locus tag: SA_RS04605 [old locus tag: SA0808 ]
- pan locus tag?: SAUPAN003048000
- symbol: SA_RS04605
- pan gene symbol?: mnhF
- synonym:
- product: Na+/H+ antiporter subunit F
⊟Genome View[edit source | edit]
⊟Gene[edit source | edit]
⊟General[edit source | edit]
- type: CDS
- locus tag: SA_RS04605 [old locus tag: SA0808 ]
- symbol: SA_RS04605
- product: Na+/H+ antiporter subunit F
- replicon: chromosome
- strand: -
- coordinates: 912700..912993
- length: 294
- essential: unknown
⊟Accession numbers[edit source | edit]
- Location: NC_002745 (912700..912993) NCBI
- MicrobesOnline:
⊟Phenotype[edit source | edit]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit source | edit]
- 1
61
121
181
241ATGAATCATAATGTTATTATCGTTATTGCATTAATCATAGTTGTCATTTCTATGTTAGCT
ATGCTCATTCGCGTTGTGCTAGGCCCATCACTTGCCGATCGTGTTGTCGCATTAGATGCG
ATTGGTCTTCAATTAATGGCAGTTATAGCATTATTCAGTATTTTATTAAATATTAAATAC
ATGATTGTCGTTATTATGATGATTGGTATATTAGCCTTTTTAGGTACTGCAGTATTCTCT
AAATTTATGGACAAAGGTAAGGTGATTGAACATGATCAAAATCATACTGATTAG60
120
180
240
294
⊟Protein[edit source | edit]
⊟General[edit source | edit]
- locus tag: SA_RS04605 [old locus tag: SA0808 ]
- symbol: SA_RS04605
- description: Na+/H+ antiporter subunit F
- length: 97
- theoretical pI: 7.7971
- theoretical MW: 10616.1
- GRAVY: 1.3701
⊟Function[edit source | edit]
- reaction:
- TIGRFAM: Mobile and extrachromosomal element functionsPlasmid functionsentry exclusion protein TrbK (TIGR04361; HMM-score: 9.9)TIGR03943 family protein (TIGR03943; HMM-score: 6.5)
- TheSEED:
- PFAM: no clan definedMrpF_PhaF; Multiple resistance and pH regulation protein F (MrpF / PhaF) (PF04066; HMM-score: 49.9)ABC-2 (CL0181) ABC2_membrane_5; ABC-2 family transporter protein (PF13346; HMM-score: 14.5)no clan definedDeltameth_res; Deltamethrin resistance (PF16020; HMM-score: 6.2)
⊟Structure, modifications & interactions[edit source | edit]
- domains:
- modifications:
- cofactors:
- effectors:
- protein partners:
⊟Localization[edit source | edit]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 3
- LocateP:
- SignalP: no predicted signal peptide
- Ymax: 0.29
- Ymax_pos: 33
- Cmax: 0.404
- Cmax_pos: 33
- Smax: 0.26
- Smax_pos: 31
- Smean: 0.178
- D: 0.246
- predicted transmembrane helices (TMHMM): 3
⊟Accession numbers[edit source | edit]
⊟Protein sequence[edit source | edit]
- MNHNVIIVIALIIVVISMLAMLIRVVLGPSLADRVVALDAIGLQLMAVIALFSILLNIKYMIVVIMMIGILAFLGTAVFSKFMDKGKVIEHDQNHTD
⊟Experimental data[edit source | edit]
- experimentally validated: no data available
⊟Expression & Regulation[edit source | edit]
⊟Operon[edit source | edit]
- SA_RS04605 no polycistronic organisation predicted
⊟Regulation[edit source | edit]
- sigma factor:
- regulator:
⊟Transcription pattern[edit source | edit]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit source | edit]
- Aureolib: no data available
⊟Protein stability[edit source | edit]
- half-life: no data available
⊟Biological Material[edit source | edit]
⊟Mutants[edit source | edit]
⊟Expression vector[edit source | edit]
⊟lacZ fusion[edit source | edit]
⊟GFP fusion[edit source | edit]
⊟two-hybrid system[edit source | edit]
⊟FLAG-tag construct[edit source | edit]
⊟Antibody[edit source | edit]
⊟Other Information[edit source | edit]
You are kindly invited to share additional interesting facts.
⊟Literature[edit source | edit]
⊟References[edit source | edit]
⊟Relevant publications[edit source | edit]