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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS04930 [old locus tag: SA0872 ]
  • pan locus tag?: SAUPAN003188000
  • symbol: SA_RS04930
  • pan gene symbol?:
  • synonym:
  • product: esterase family protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SA_RS04930 [old locus tag: SA0872 ]
  • symbol: SA_RS04930
  • product: esterase family protein
  • replicon: chromosome
  • strand: +
  • coordinates: 988141..988899
  • length: 759
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002745 (988141..988899) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGTCAGAATTTAAAACTGGTAAGATTAATAAACATGTTTTATATAGTAATATTTTAAAT
    AGAGATGTCACGATAAGTATTTATTTACCAGAATCTTATAATCAACTTGTTAAATATAAT
    GTCATTCTTTGCTTTGACGGATTAGATTTTTTACGTTTCGGGAGAATACAACGTACATAT
    GAATCGTTAATCAAAGAAGCGCGTATTGATGATGCGATCATTGTTGGATTCCATTATGAA
    GACGTTGATAAGCGTAGAGAGGAATTTCATCCACAAGGAAGTCGTTCTCATTTAACTATT
    CAATCAGTCGGTAAAGAAATATTGCCATTTATTGACTCGACGTTTTCTACACTGAAAGTA
    GGTAATGCAAGGTTATTAGTAGGGGATAGTTTAGCGGGTAGTATTGCCTTATTAACGGCG
    TTGACCTATCCAACGATTTTTAGTCGTGTAGCAATGTTAAGTCCACATTCAGATGACAAA
    GTATTAGATAAGCTAAATCAATGTGCTAATAAAGAACAATTGACAATTTGGCATGTCATT
    GGTCTAGATGAAAAAGATTTTACTTTACCAACAAATGGTAAGCGTGCCGATTTCTTAACA
    CCGAATAGAGAATTAGCTGAACAAATTAAGAAATATAATATAACTTATTATTACGATGAA
    TTTGAAGGTGGTCACCAATGGAAAGATTGGAAACCATTGCTGTCAGATATATTATTGTAT
    TTTTTACGTAAAAACACAGATGATCAACATTATGAGTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    759

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SA_RS04930 [old locus tag: SA0872 ]
  • symbol: SA_RS04930
  • description: esterase family protein
  • length: 252
  • theoretical pI: 6.51601
  • theoretical MW: 29262.1
  • GRAVY: -0.371429

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    Cellular processesCellular processesDetoxificationS-formylglutathione hydrolase (TIGR02821; EC 3.1.2.12; HMM-score: 12.7)
  • TheSEED:
  • PFAM:
    AB_hydrolase (CL0028) Esterase; Putative esterase (PF00756; HMM-score: 194.7)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.107
    • Ymax_pos: 11
    • Cmax: 0.104
    • Cmax_pos: 39
    • Smax: 0.158
    • Smax_pos: 3
    • Smean: 0.112
    • D: 0.109
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI: 447211419 NCBI
  • RefSeq: WP_001288675 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MSEFKTGKINKHVLYSNILNRDVTISIYLPESYNQLVKYNVILCFDGLDFLRFGRIQRTYESLIKEARIDDAIIVGFHYEDVDKRREEFHPQGSRSHLTIQSVGKEILPFIDSTFSTLKVGNARLLVGDSLAGSIALLTALTYPTIFSRVAMLSPHSDDKVLDKLNQCANKEQLTIWHVIGLDEKDFTLPTNGKRADFLTPNRELAEQIKKYNITYYYDEFEGGHQWKDWKPLLSDILLYFLRKNTDDQHYE

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SA_RS04930 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]