NCBI: 02-MAR-2017

⊟Summary

• organism: Staphylococcus aureus N315
• locus tag: SA_RS10490 [old locus tag: SA1828 ]
• pan locus tag^?: SAUPAN005228000
• symbol: SA_RS10490
• pan gene symbol^?: —
• synonym:
• product: hypothetical protein

⊟Gene

⊟General

• type: CDS
• locus tag: SA_RS10490 [old locus tag: SA1828 ]
• symbol: SA_RS10490
• product: hypothetical protein
• replicon: chromosome
• strand: -
• coordinates: 2066368..2068077
• length: 1710
• essential: unknown

⊟Accession numbers

• Location: NC_002745 (2066368..2068077) NCBI
• BioCyc: G1G21-2119 BioCyc
• MicrobesOnline:

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  121
  181
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  361
  421
  481
  541
  601
  661
  721
  781
  841
  901
  961
  1021
  1081
  1141
  1201
  1261
  1321
  1381
  1441
  1501
  1561
  1621
  1681
  
  ATGGAAACAGGTAAAAGTGATGTACTTGATAAAATTGAAAAAATTAATAAAAAAGATAGT
  GCCTTACAAGAAATTATACCGAAAGGCTATGAAATTGAACATCATCAATGCGGTGTTGCC
  TTATACCAACTTATACCAAGTAAAAAAGAAGGCGAACCAGATAAAAAGGTTTTTATCACA
  AATACAATCCCTCAAATTACTGAACGCTTTGAAGATATTGAGAGTAACGAAGTTAGCTTT
  AATATGCTTTTCTATGACAATAAAACGCCAGTAAATATAGCTGTGAGTGCCGAAGAAATT
  TCAGATAGTCGTCAACTCTTGAAATTGGTTAATAAAAAGCTAGATGTAACATCGTCGACA
  TCTACTAAACTTGTTGACTATATTAATGTATCTAAAAGGTATAATCCACCATTAAATGTT
  AAAGTTGCAACGCGTTTGGGGCATGTGAAAGGTTATTTTATTTATCCTTATCAAGAAGTA
  ATGAAAGACAGCAATGTCAAGTTGTTTAGCAATGATAAAGGGTTTCAAAAGTTAATAGAC
  TCTTTTCGAAGTAAAGGAACACTACAAGGTTACTCTAAAAAGGTGTTTGCTCAAATAAAA
  GATTTACCAATGGTAATGGTTATGTTGTATGCATCTTTAGGCTCAGTTTTATTAAGAGAA
  TTTGGATTACAACCCTTTATTGTAGAAATATCAGGTAGTACATCCACAGGTAAAACATTC
  ACACTCAACTTAGTATCAAGTGTTTGGGGAACCAGTGACCTTATTACGACATGGAGTTCT
  ACTCAAAATAGTATTGAATCAATGGCGTCATTTTTGAACTCATTTCCAATGTTTAAAGAT
  GATACGCGTAACACACATCCTAAGTTTGTTACCAGTACCACATATAACTTTTCTAGTGGT
  GAAAGTAAATCGAGAAGTAATATTAATTTAACGCTAAATGCTAAAAAAGAATGGCGAAAT
  ATTTTAATTTCTACTGGTGAATCATCTATCGCAAATATGGCTGATGAAAAAGCGGGTGTA
  TCAGCACGTGTAGTTACACTACAAGATCCACCATATCCAGATAATTTTGATTTTACCACA
  TTAGACAAATCGTTTAGGGAGAACTATGGAACGTTAGGGTTGGCATTTATTAAACAATAT
  GAGTCTAAAAAAGACGTGTATAAGAACGCTTTTGAGAGCTATCAACGGTATTTTAATCAA
  AAAGGTAGTAATGAAATCATGCAACGTTTAGGACGTGCCTTTGCGTTACTACAAGTTACC
  GGTGAGGTTTTGAATGATATTGATGGGTTTGAACATGACCATTTTAAAATTATCGAACAA
  GCCTATGACAGCATGGTTAAAAACAATAAGACGATTGATAAACCTAAGCAACTGTTAGAG
  GAACTATTACAATATTTAGATGCGAATAGAAATAATATTGTAGGTGACGGTTATGATTCA
  GTAAATTACGGAGATGTTAAAGCGGTATATAAACATGATTTTCTTTGTATTAAAAACGAA
  ACTGTTAAAAATAAATTAGGACACGAAATGCAGACGATTACAGGGCAATGGGACAAAAAA
  GGTTATTTAATAAAAGATAAAAAAAGAATTCAAAAACAAGTAAAACATAAATCTCAAAGG
  CATCTGGGTTATGCGATTAAAAAAGAAATAATTGAAGAACTAGGATTTGATTTCTCGATT
  TCACATAATCCATATACAGAAAGTTATTAG
  60
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  1140
  1200
  1260
  1320
  1380
  1440
  1500
  1560
  1620
  1680
  1710
  

⊟Protein

⊟General

• locus tag: SA_RS10490 [old locus tag: SA1828 ]
• symbol: SA_RS10490
• description: hypothetical protein
• length: 569
• theoretical pI: 8.99487
• theoretical MW: 64960.3
• GRAVY: -0.529525

⊟Function

• TIGRFAM:
• TheSEED:
• PFAM:
  P-loop_NTPase (CL0023) DUF927; Domain of unknown function (DUF927) (PF06048; HMM-score: 142.8)
  and 2 more
  no clan definedCENP-K; Centromere-associated protein K (PF11802; HMM-score: 16.6)
  P-loop_NTPase (CL0023) T2SSE; Type II/IV secretion system protein (PF00437; HMM-score: 11.1)

⊟Structure, modifications & interactions

• domains:
• modifications:
• cofactors:
• effectors:
• protein partners:

⊟Localization

• PSORTb: unknown (no significant prediction)
  • Cytoplasmic Score: 2.5
  • Cytoplasmic Membrane Score: 2.5
  • Cellwall Score: 2.5
  • Extracellular Score: 2.5
  • Internal Helices: 0
• LocateP:
• SignalP: no predicted signal peptide
  • Ymax: 0.101
  • Ymax_pos: 59
  • Cmax: 0.111
  • Cmax_pos: 50
  • Smax: 0.13
  • Smax_pos: 49
  • Smean: 0.082
  • D: 0.093
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI: 446369618 NCBI
• RefSeq: WP_000447473 NCBI
• UniProt:

⊟Protein sequence

• METGKSDVLDKIEKINKKDSALQEIIPKGYEIEHHQCGVALYQLIPSKKEGEPDKKVFITNTIPQITERFEDIESNEVSFNMLFYDNKTPVNIAVSAEEISDSRQLLKLVNKKLDVTSSTSTKLVDYINVSKRYNPPLNVKVATRLGHVKGYFIYPYQEVMKDSNVKLFSNDKGFQKLIDSFRSKGTLQGYSKKVFAQIKDLPMVMVMLYASLGSVLLREFGLQPFIVEISGSTSTGKTFTLNLVSSVWGTSDLITTWSSTQNSIESMASFLNSFPMFKDDTRNTHPKFVTSTTYNFSSGESKSRSNINLTLNAKKEWRNILISTGESSIANMADEKAGVSARVVTLQDPPYPDNFDFTTLDKSFRENYGTLGLAFIKQYESKKDVYKNAFESYQRYFNQKGSNEIMQRLGRAFALLQVTGEVLNDIDGFEHDHFKIIEQAYDSMVKNNKTIDKPKQLLEELLQYLDANRNNIVGDGYDSVNYGDVKAVYKHDFLCIKNETVKNKLGHEMQTITGQWDKKGYLIKDKKRIQKQVKHKSQRHLGYAIKKEIIEELGFDFSISHNPYTESY

⊟Experimental data

• experimentally validated: no data available

⊟Expression & Regulation

⊟Operon

• SA_RS10490 no polycistronic organisation predicted

⊟Regulation

• sigma factor:
• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Other Information

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