NCBI: 02-MAR-2017

⊟Summary

• organism: Staphylococcus aureus N315
• locus tag: SA_RS10490 [old locus tag: SA1828 ]
• pan locus tag^?: SAUPAN005228000
• symbol: SA_RS10490
• pan gene symbol^?: —
• synonym:
• product: hypothetical protein

⊟Gene

⊟General

• type: CDS
• locus tag: SA_RS10490 [old locus tag: SA1828 ]
• symbol: SA_RS10490
• product: hypothetical protein
• replicon: chromosome
• strand: -
• coordinates: 2066368..2068077
• length: 1710
• essential: unknown

⊟Accession numbers

• Location: NC_002745 (2066368..2068077) NCBI
• MicrobesOnline:

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  121
  181
  241
  301
  361
  421
  481
  541
  601
  661
  721
  781
  841
  901
  961
  1021
  1081
  1141
  1201
  1261
  1321
  1381
  1441
  1501
  1561
  1621
  1681
  
  ATGGAAACAGGTAAAAGTGATGTACTTGATAAAATTGAAAAAATTAATAAAAAAGATAGT
  GCCTTACAAGAAATTATACCGAAAGGCTATGAAATTGAACATCATCAATGCGGTGTTGCC
  TTATACCAACTTATACCAAGTAAAAAAGAAGGCGAACCAGATAAAAAGGTTTTTATCACA
  AATACAATCCCTCAAATTACTGAACGCTTTGAAGATATTGAGAGTAACGAAGTTAGCTTT
  AATATGCTTTTCTATGACAATAAAACGCCAGTAAATATAGCTGTGAGTGCCGAAGAAATT
  TCAGATAGTCGTCAACTCTTGAAATTGGTTAATAAAAAGCTAGATGTAACATCGTCGACA
  TCTACTAAACTTGTTGACTATATTAATGTATCTAAAAGGTATAATCCACCATTAAATGTT
  AAAGTTGCAACGCGTTTGGGGCATGTGAAAGGTTATTTTATTTATCCTTATCAAGAAGTA
  ATGAAAGACAGCAATGTCAAGTTGTTTAGCAATGATAAAGGGTTTCAAAAGTTAATAGAC
  TCTTTTCGAAGTAAAGGAACACTACAAGGTTACTCTAAAAAGGTGTTTGCTCAAATAAAA
  GATTTACCAATGGTAATGGTTATGTTGTATGCATCTTTAGGCTCAGTTTTATTAAGAGAA
  TTTGGATTACAACCCTTTATTGTAGAAATATCAGGTAGTACATCCACAGGTAAAACATTC
  ACACTCAACTTAGTATCAAGTGTTTGGGGAACCAGTGACCTTATTACGACATGGAGTTCT
  ACTCAAAATAGTATTGAATCAATGGCGTCATTTTTGAACTCATTTCCAATGTTTAAAGAT
  GATACGCGTAACACACATCCTAAGTTTGTTACCAGTACCACATATAACTTTTCTAGTGGT
  GAAAGTAAATCGAGAAGTAATATTAATTTAACGCTAAATGCTAAAAAAGAATGGCGAAAT
  ATTTTAATTTCTACTGGTGAATCATCTATCGCAAATATGGCTGATGAAAAAGCGGGTGTA
  TCAGCACGTGTAGTTACACTACAAGATCCACCATATCCAGATAATTTTGATTTTACCACA
  TTAGACAAATCGTTTAGGGAGAACTATGGAACGTTAGGGTTGGCATTTATTAAACAATAT
  GAGTCTAAAAAAGACGTGTATAAGAACGCTTTTGAGAGCTATCAACGGTATTTTAATCAA
  AAAGGTAGTAATGAAATCATGCAACGTTTAGGACGTGCCTTTGCGTTACTACAAGTTACC
  GGTGAGGTTTTGAATGATATTGATGGGTTTGAACATGACCATTTTAAAATTATCGAACAA
  GCCTATGACAGCATGGTTAAAAACAATAAGACGATTGATAAACCTAAGCAACTGTTAGAG
  GAACTATTACAATATTTAGATGCGAATAGAAATAATATTGTAGGTGACGGTTATGATTCA
  GTAAATTACGGAGATGTTAAAGCGGTATATAAACATGATTTTCTTTGTATTAAAAACGAA
  ACTGTTAAAAATAAATTAGGACACGAAATGCAGACGATTACAGGGCAATGGGACAAAAAA
  GGTTATTTAATAAAAGATAAAAAAAGAATTCAAAAACAAGTAAAACATAAATCTCAAAGG
  CATCTGGGTTATGCGATTAAAAAAGAAATAATTGAAGAACTAGGATTTGATTTCTCGATT
  TCACATAATCCATATACAGAAAGTTATTAG
  60
  120
  180
  240
  300
  360
  420
  480
  540
  600
  660
  720
  780
  840
  900
  960
  1020
  1080
  1140
  1200
  1260
  1320
  1380
  1440
  1500
  1560
  1620
  1680
  1710
  

⊟Protein

⊟General

• locus tag: SA_RS10490 [old locus tag: SA1828 ]
• symbol: SA_RS10490
• description: hypothetical protein
• length: 569
• theoretical pI: 8.99487
• theoretical MW: 64960.3
• GRAVY: -0.529525

⊟Function

• TIGRFAM:
• TheSEED:
• PFAM:
  P-loop_NTPase (CL0023) DUF927; Domain of unknown function (DUF927) (PF06048; HMM-score: 142.8)
  and 2 more
  no clan definedCENP-K; Centromere-associated protein K (PF11802; HMM-score: 16.6)
  P-loop_NTPase (CL0023) T2SSE; Type II/IV secretion system protein (PF00437; HMM-score: 11.1)

⊟Structure, modifications & interactions

• domains:
• modifications:
• cofactors:
• effectors:
• protein partners:

⊟Localization

• PSORTb: unknown (no significant prediction)
  • Cytoplasmic Score: 2.5
  • Cytoplasmic Membrane Score: 2.5
  • Cellwall Score: 2.5
  • Extracellular Score: 2.5
  • Internal Helices: 0
• LocateP:
• SignalP: no predicted signal peptide
  • Ymax: 0.101
  • Ymax_pos: 59
  • Cmax: 0.111
  • Cmax_pos: 50
  • Smax: 0.13
  • Smax_pos: 49
  • Smean: 0.082
  • D: 0.093
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI: 446369618 NCBI
• RefSeq: WP_000447473 NCBI
• UniProt:

⊟Protein sequence

• METGKSDVLDKIEKINKKDSALQEIIPKGYEIEHHQCGVALYQLIPSKKEGEPDKKVFITNTIPQITERFEDIESNEVSFNMLFYDNKTPVNIAVSAEEISDSRQLLKLVNKKLDVTSSTSTKLVDYINVSKRYNPPLNVKVATRLGHVKGYFIYPYQEVMKDSNVKLFSNDKGFQKLIDSFRSKGTLQGYSKKVFAQIKDLPMVMVMLYASLGSVLLREFGLQPFIVEISGSTSTGKTFTLNLVSSVWGTSDLITTWSSTQNSIESMASFLNSFPMFKDDTRNTHPKFVTSTTYNFSSGESKSRSNINLTLNAKKEWRNILISTGESSIANMADEKAGVSARVVTLQDPPYPDNFDFTTLDKSFRENYGTLGLAFIKQYESKKDVYKNAFESYQRYFNQKGSNEIMQRLGRAFALLQVTGEVLNDIDGFEHDHFKIIEQAYDSMVKNNKTIDKPKQLLEELLQYLDANRNNIVGDGYDSVNYGDVKAVYKHDFLCIKNETVKNKLGHEMQTITGQWDKKGYLIKDKKRIQKQVKHKSQRHLGYAIKKEIIEELGFDFSISHNPYTESY

⊟Experimental data

• experimentally validated: no data available

⊟Expression & Regulation

⊟Operon

• SA_RS10490 no polycistronic organisation predicted

⊟Regulation

• sigma factor:
• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Other Information

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