NCBI: 02-MAR-2017
Contents
⊟Summary[edit source | edit]
- organism: Staphylococcus aureus N315
- locus tag: SA_RS10490 [old locus tag: SA1828 ]
- pan locus tag?: SAUPAN005228000
- symbol: SA_RS10490
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit source | edit]
⊟Gene[edit source | edit]
⊟General[edit source | edit]
- type: CDS
- locus tag: SA_RS10490 [old locus tag: SA1828 ]
- symbol: SA_RS10490
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 2066368..2068077
- length: 1710
- essential: unknown
⊟Accession numbers[edit source | edit]
- Location: NC_002745 (2066368..2068077) NCBI
- MicrobesOnline:
⊟Phenotype[edit source | edit]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit source | edit]
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1681ATGGAAACAGGTAAAAGTGATGTACTTGATAAAATTGAAAAAATTAATAAAAAAGATAGT
GCCTTACAAGAAATTATACCGAAAGGCTATGAAATTGAACATCATCAATGCGGTGTTGCC
TTATACCAACTTATACCAAGTAAAAAAGAAGGCGAACCAGATAAAAAGGTTTTTATCACA
AATACAATCCCTCAAATTACTGAACGCTTTGAAGATATTGAGAGTAACGAAGTTAGCTTT
AATATGCTTTTCTATGACAATAAAACGCCAGTAAATATAGCTGTGAGTGCCGAAGAAATT
TCAGATAGTCGTCAACTCTTGAAATTGGTTAATAAAAAGCTAGATGTAACATCGTCGACA
TCTACTAAACTTGTTGACTATATTAATGTATCTAAAAGGTATAATCCACCATTAAATGTT
AAAGTTGCAACGCGTTTGGGGCATGTGAAAGGTTATTTTATTTATCCTTATCAAGAAGTA
ATGAAAGACAGCAATGTCAAGTTGTTTAGCAATGATAAAGGGTTTCAAAAGTTAATAGAC
TCTTTTCGAAGTAAAGGAACACTACAAGGTTACTCTAAAAAGGTGTTTGCTCAAATAAAA
GATTTACCAATGGTAATGGTTATGTTGTATGCATCTTTAGGCTCAGTTTTATTAAGAGAA
TTTGGATTACAACCCTTTATTGTAGAAATATCAGGTAGTACATCCACAGGTAAAACATTC
ACACTCAACTTAGTATCAAGTGTTTGGGGAACCAGTGACCTTATTACGACATGGAGTTCT
ACTCAAAATAGTATTGAATCAATGGCGTCATTTTTGAACTCATTTCCAATGTTTAAAGAT
GATACGCGTAACACACATCCTAAGTTTGTTACCAGTACCACATATAACTTTTCTAGTGGT
GAAAGTAAATCGAGAAGTAATATTAATTTAACGCTAAATGCTAAAAAAGAATGGCGAAAT
ATTTTAATTTCTACTGGTGAATCATCTATCGCAAATATGGCTGATGAAAAAGCGGGTGTA
TCAGCACGTGTAGTTACACTACAAGATCCACCATATCCAGATAATTTTGATTTTACCACA
TTAGACAAATCGTTTAGGGAGAACTATGGAACGTTAGGGTTGGCATTTATTAAACAATAT
GAGTCTAAAAAAGACGTGTATAAGAACGCTTTTGAGAGCTATCAACGGTATTTTAATCAA
AAAGGTAGTAATGAAATCATGCAACGTTTAGGACGTGCCTTTGCGTTACTACAAGTTACC
GGTGAGGTTTTGAATGATATTGATGGGTTTGAACATGACCATTTTAAAATTATCGAACAA
GCCTATGACAGCATGGTTAAAAACAATAAGACGATTGATAAACCTAAGCAACTGTTAGAG
GAACTATTACAATATTTAGATGCGAATAGAAATAATATTGTAGGTGACGGTTATGATTCA
GTAAATTACGGAGATGTTAAAGCGGTATATAAACATGATTTTCTTTGTATTAAAAACGAA
ACTGTTAAAAATAAATTAGGACACGAAATGCAGACGATTACAGGGCAATGGGACAAAAAA
GGTTATTTAATAAAAGATAAAAAAAGAATTCAAAAACAAGTAAAACATAAATCTCAAAGG
CATCTGGGTTATGCGATTAAAAAAGAAATAATTGAAGAACTAGGATTTGATTTCTCGATT
TCACATAATCCATATACAGAAAGTTATTAG60
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⊟Protein[edit source | edit]
⊟General[edit source | edit]
- locus tag: SA_RS10490 [old locus tag: SA1828 ]
- symbol: SA_RS10490
- description: hypothetical protein
- length: 569
- theoretical pI: 8.99487
- theoretical MW: 64960.3
- GRAVY: -0.529525
⊟Function[edit source | edit]
- reaction:
- TIGRFAM:
- TheSEED:
- PFAM: P-loop_NTPase (CL0023) DUF927; Domain of unknown function (DUF927) (PF06048; HMM-score: 142.8)no clan definedCENP-K; Centromere-associated protein K (PF11802; HMM-score: 16.6)P-loop_NTPase (CL0023) T2SSE; Type II/IV secretion system protein (PF00437; HMM-score: 11.1)
⊟Structure, modifications & interactions[edit source | edit]
- domains:
- modifications:
- cofactors:
- effectors:
- protein partners:
⊟Localization[edit source | edit]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- Ymax: 0.101
- Ymax_pos: 59
- Cmax: 0.111
- Cmax_pos: 50
- Smax: 0.13
- Smax_pos: 49
- Smean: 0.082
- D: 0.093
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit source | edit]
⊟Protein sequence[edit source | edit]
- METGKSDVLDKIEKINKKDSALQEIIPKGYEIEHHQCGVALYQLIPSKKEGEPDKKVFITNTIPQITERFEDIESNEVSFNMLFYDNKTPVNIAVSAEEISDSRQLLKLVNKKLDVTSSTSTKLVDYINVSKRYNPPLNVKVATRLGHVKGYFIYPYQEVMKDSNVKLFSNDKGFQKLIDSFRSKGTLQGYSKKVFAQIKDLPMVMVMLYASLGSVLLREFGLQPFIVEISGSTSTGKTFTLNLVSSVWGTSDLITTWSSTQNSIESMASFLNSFPMFKDDTRNTHPKFVTSTTYNFSSGESKSRSNINLTLNAKKEWRNILISTGESSIANMADEKAGVSARVVTLQDPPYPDNFDFTTLDKSFRENYGTLGLAFIKQYESKKDVYKNAFESYQRYFNQKGSNEIMQRLGRAFALLQVTGEVLNDIDGFEHDHFKIIEQAYDSMVKNNKTIDKPKQLLEELLQYLDANRNNIVGDGYDSVNYGDVKAVYKHDFLCIKNETVKNKLGHEMQTITGQWDKKGYLIKDKKRIQKQVKHKSQRHLGYAIKKEIIEELGFDFSISHNPYTESY
⊟Experimental data[edit source | edit]
- experimentally validated: no data available
⊟Expression & Regulation[edit source | edit]
⊟Operon[edit source | edit]
- SA_RS10490 no polycistronic organisation predicted
⊟Regulation[edit source | edit]
- sigma factor:
- regulator:
⊟Transcription pattern[edit source | edit]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit source | edit]
- Aureolib: no data available
⊟Protein stability[edit source | edit]
- half-life: no data available
⊟Biological Material[edit source | edit]
⊟Mutants[edit source | edit]
⊟Expression vector[edit source | edit]
⊟lacZ fusion[edit source | edit]
⊟GFP fusion[edit source | edit]
⊟two-hybrid system[edit source | edit]
⊟FLAG-tag construct[edit source | edit]
⊟Antibody[edit source | edit]
⊟Other Information[edit source | edit]
You are kindly invited to share additional interesting facts.
⊟Literature[edit source | edit]
⊟References[edit source | edit]
⊟Relevant publications[edit source | edit]