NCBI: 02-MAR-2017
Contents
⊟Summary[edit source | edit]
- organism: Staphylococcus aureus N315
- locus tag: SA_RS12150 [old locus tag: SA2113 ]
- pan locus tag?: SAUPAN005802000
- symbol: SA_RS12150
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit source | edit]
⊟Gene[edit source | edit]
⊟General[edit source | edit]
- type: CDS
- locus tag: SA_RS12150 [old locus tag: SA2113 ]
- symbol: SA_RS12150
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 2376135..2376665
- length: 531
- essential: unknown
⊟Accession numbers[edit source | edit]
- Location: NC_002745 (2376135..2376665) NCBI
- MicrobesOnline:
⊟Phenotype[edit source | edit]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit source | edit]
- 1
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481ATGTTAATTGATAAATTCGAAACATACATCATCAACATCGCCGGTTTAAATGACCGTACT
ACTAGAAAAAAATTAAGTAAGTTATGCAAAAGTGTACAATTTTGTGATGCGTTGCAATTC
TCAATAAACAAACAGTTTAATCAGTATGTATTAGAAATTAGCTTACCAAAGCAACAACTT
CCATACTTCATTTCATTTTTAAGTTTTCATCAGTATAGTATTTTCCAAGTACTTTCACCA
AAGAAAATAAATGAATTACTTGATTCTGATAATTTATATCAATCTGCAAAGCGTTTCGAT
ATCAATATTGATGGCTTGCAAGATGCTTTCATTAAAGACAAAGTCATCGATATTATGAAT
ATGTTCCAAAATCACACTGATATCACTTATACGTTGAATAAGTCTCATGCACATATTATA
TGTACGCCAGAAATATTTGCTAAATTGTTACATACGATTGCAACTAGAAATATCGACATT
CTATCTGCCAATTATAGATCGTCATCTATGAGCAAAGCTCGTATATCATAA60
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531
⊟Protein[edit source | edit]
⊟General[edit source | edit]
- locus tag: SA_RS12150 [old locus tag: SA2113 ]
- symbol: SA_RS12150
- description: hypothetical protein
- length: 176
- theoretical pI: 9.33923
- theoretical MW: 20437.5
- GRAVY: -0.142614
⊟Function[edit source | edit]
- reaction:
- TIGRFAM:
- TheSEED:
- PFAM:
⊟Structure, modifications & interactions[edit source | edit]
- domains:
- modifications:
- cofactors:
- effectors:
- protein partners:
⊟Localization[edit source | edit]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- Ymax: 0.138
- Ymax_pos: 40
- Cmax: 0.116
- Cmax_pos: 25
- Smax: 0.233
- Smax_pos: 34
- Smean: 0.13
- D: 0.135
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit source | edit]
⊟Protein sequence[edit source | edit]
- MLIDKFETYIINIAGLNDRTTRKKLSKLCKSVQFCDALQFSINKQFNQYVLEISLPKQQLPYFISFLSFHQYSIFQVLSPKKINELLDSDNLYQSAKRFDINIDGLQDAFIKDKVIDIMNMFQNHTDITYTLNKSHAHIICTPEIFAKLLHTIATRNIDILSANYRSSSMSKARIS
⊟Experimental data[edit source | edit]
- experimentally validated: no data available
⊟Expression & Regulation[edit source | edit]
⊟Operon[edit source | edit]
- SA_RS12150 no polycistronic organisation predicted
⊟Regulation[edit source | edit]
- sigma factor:
- regulator:
⊟Transcription pattern[edit source | edit]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit source | edit]
- Aureolib: no data available
⊟Protein stability[edit source | edit]
- half-life: no data available
⊟Biological Material[edit source | edit]
⊟Mutants[edit source | edit]
⊟Expression vector[edit source | edit]
⊟lacZ fusion[edit source | edit]
⊟GFP fusion[edit source | edit]
⊟two-hybrid system[edit source | edit]
⊟FLAG-tag construct[edit source | edit]
⊟Antibody[edit source | edit]
⊟Other Information[edit source | edit]
You are kindly invited to share additional interesting facts.
⊟Literature[edit source | edit]
⊟References[edit source | edit]
⊟Relevant publications[edit source | edit]