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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_RS03150 [old locus tag: NWMN_0549 ]
  • pan locus tag?: SAUPAN002364000
  • symbol: NWMN_RS03150
  • pan gene symbol?: —
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: NWMN_RS03150 [old locus tag: NWMN_0549 ]
  • symbol: NWMN_RS03150
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 632405..633169
  • length: 765
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_009641 (632405..633169) NCBI
  • BioCyc:
  • MicrobesOnline: see NWMN_0549

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGGACATAAATTCAGAAGAATACAAACAAGAGGTACTTATCAAAGACGTTGTCATGCTT
    GCTGCTCGCATACTATTAGAATCTGGTGCAGAAGGTACGCGTGTAGAAGATACCATGACA
    CGTATTGCAAAAAAACTTGGTTACAGTGAAAGTAACAGCTTTGTTACAAACACTGTCATC
    CAGTTTACGTTACATTCGGAATCGTTTCCTAGAATATTTAGAATTACCTCTCGAGATACA
    AACTTAATAAAAATTTCTCAAGCTAATAAAATTTCGCGTCAAATTACAAACAATGAAATT
    TCTTTAGCCGAAGCAAAAACGCAACTTGAAAAAATATATGTTGCTAAGCGTGACAGCAGT
    CTTCCCTTTAAAGGTTTTGCTGCAGCAATGATTGCAATGAGTTTCTTATATTTACAAGGT
    GGTAGATTGATTGATGTTTTAACTGCGATATTAGCAGGTAGTCTAGGATACCTAGTCACT
    GAGATTTTAGATCGTAAGTTACACGCACAGTTTATCCCAGAATTCATTGGTTCATTAGTT
    ATTGGGATTATCGCCGTTATTGGACATACACTTATTCCAACAGGTGACTTGGCAACTATT
    ATCATTGCGGCAGTCATGCCTATTGTTCCTGGTGTATTAATAACAAACGCAATACAAGAT
    TTATTTGGTGGACACATGTTGATGTTCACAACGAAATCATTAGAAGCATTGGTTACTGCG
    TTTGGCATCGGTGCTGGCGTTGGTAGCGTATTAATTTTAGTATAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    765

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: NWMN_RS03150 [old locus tag: NWMN_0549 ]
  • symbol: NWMN_RS03150
  • description: hypothetical protein
  • length: 254
  • theoretical pI: 6.97582
  • theoretical MW: 27556.2
  • GRAVY: 0.501969

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED: data available for COL, N315, NCTC8325, USA300_FPR3757
  • PFAM:
    UMP_1 (CL0470) ThrE; Putative threonine/serine exporter (PF06738; HMM-score: 206.2)
    and 3 more
    ThrE_2; Threonine/Serine exporter, ThrE (PF12821; HMM-score: 42.1)
    Ferritin (CL0044) Ribonuc_red_sm; Ribonucleotide reductase, small chain (PF00268; HMM-score: 13.5)
    no clan defined RseC_MucC; Positive regulator of sigma(E), RseC/MucC (PF04246; HMM-score: 8.8)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.01
    • Cytoplasmic Membrane Score: 9.35
    • Cellwall Score: 0.32
    • Extracellular Score: 0.32
    • Internal Helices: 5
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.008942
    • TAT(Tat/SPI): 0.001427
    • LIPO(Sec/SPII): 0.001429
  • predicted transmembrane helices (TMHMM): 4

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MDINSEEYKQEVLIKDVVMLAARILLESGAEGTRVEDTMTRIAKKLGYSESNSFVTNTVIQFTLHSESFPRIFRITSRDTNLIKISQANKISRQITNNEISLAEAKTQLEKIYVAKRDSSLPFKGFAAAMIAMSFLYLQGGRLIDVLTAILAGSLGYLVTEILDRKLHAQFIPEFIGSLVIGIIAVIGHTLIPTGDLATIIIAAVMPIVPGVLITNAIQDLFGGHMLMFTTKSLEALVTAFGIGAGVGSVLILV

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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