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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS12890 [old locus tag: NWMN_2237 ]
- pan locus tag?: SAUPAN005825000
- symbol: NWMN_RS12890
- pan gene symbol?: rpiA
- synonym:
- product: ribose-5-phosphate isomerase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_RS12890 [old locus tag: NWMN_2237 ]
- symbol: NWMN_RS12890
- product: ribose-5-phosphate isomerase
- replicon: chromosome
- strand: -
- coordinates: 2460592..2461278
- length: 687
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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661ATGAAAGATGTCAAAGCACTCAAGTTAATGACATTAAATGATGTTTTAAGTCAAATCAAT
GGTGACATGACGCTGGGAATTGGTACAGGAAGTACAATGGAATTACTCTTACCTCAAATG
GCGCAACTAATTAAAGAACGTGGTTACAATATTACAGGTGTATGCACTTCTAATAAAATT
GCATTTTTAGCAAAAGAATTAGGTATTAAAATATGTGAAATCAATGATGTTGATCATATC
GACTTAGCAATTGATGGTGCTGATGAAGTAGATCCATCTTTAAATATAATTAAAGGTGGC
GGTGGTGCGCTGTTCAGAGAGAAAGTTATAGATGAAATGGCATCGCGTTTTGTTGTGGTT
GTCGATGAAACGAAAATAGTTCAATACTTAGGTGAGACGTTTAAGTTACCAGTAGAGGTG
GATAAATTTAACTGGTATCACATATTACGTAAAATTGAATCATACGCTGATATAAAAGTA
GAACGTCGTGTAAACGAAGATGTCGCATTTATAACTGATAATGGCAATTATATTTTAGAT
TGTAAGTTACCAAAAGGAATTGACCCATATAAGTTCCATGAGTATTTAATTCATCTGACA
GGTGTGTTTGAGACAGGATACTTCTTAGATATGGCAGATCAAGTTATTGTAGGCACTCAA
GAGGGTGTTAAAATTTTAGAAAAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_RS12890 [old locus tag: NWMN_2237 ]
- symbol: NWMN_RS12890
- description: ribose-5-phosphate isomerase
- length: 228
- theoretical pI: 4.62139
- theoretical MW: 25549.4
- GRAVY: 0.020614
⊟Function[edit | edit source]
- ⊞reaction: EC 5.3.1.6? ExPASy
- TIGRFAM: Energy metabolism Pentose phosphate pathway ribose 5-phosphate isomerase A (TIGR00021; EC 5.3.1.6; HMM-score: 262.3)
- TheSEED: data available for COL, N315, NCTC8325, USA300_FPR3757
- ⊞PFAM: ISOCOT_Fold (CL0246) Rib_5-P_isom_A; Ribose 5-phosphate isomerase A (phosphoriboisomerase A) (PF06026; HMM-score: 200.6)and 2 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKDVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLIKERGYNITGVCTSNKIAFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYLGETFKLPVEVDKFNWYHILRKIESYADIKVERRVNEDVAFITDNGNYILDCKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available