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NCBI: 26-AUG-2013

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA0596 [new locus tag: SA_RS03425 ]
  • pan locus tag?: SAUPAN002517000
  • symbol: tagX
  • pan gene symbol?: tagX
  • synonym:
  • product: teichoic acid biosynthesis protein X

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA0596 [new locus tag: SA_RS03425 ]
  • symbol: tagX
  • product: teichoic acid biosynthesis protein X
  • replicon: chromosome
  • strand: +
  • coordinates: 689103..690110
  • length: 1008
  • essential: no DEG other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    TTGTTAATATCTATTGAGAGTAAAGAACACTATAGAATCCTTTGTATTGATGGTGGTTCT
    ACTGATCAAACAATTCCTATGATTGAACGGTTACAAAGAGAACTCAAGCATATTTCATTA
    ATACAATTACAAAATGCTTCGATAGCTACGTGTATTAATAAAGGTTTGATGGATATCAAA
    ATGACAGATCCACATGATAGTGACGCATTTATGGTCATAAATCCAACATCAATCGTATTG
    CCAGGTAAATTAGATAGGTTAACTGCAGCTTTCAAAAATAATGATAATATTGATATGGTA
    ATAGGGCAGCGAGCTTACAATTACCATGGTGAATGGAAATTGAAAAGTGCTGATGAGTTT
    ATTAAAGATAATCGAATCGTTACATTAACGGAACAACCAGATTTGTTATCAATGATGTCT
    TTTGACGGAAAGTTATTCAGTGCTAAATTTGCTGAATTACAGTGTGACGAAACTTTAGCT
    AACACATACAATCACGCAATACTTGTCAAGGCGATGCAAAAAGCTACGGATATACATTTA
    GTTTCACAGATGATTGTCGGAGATAACGATATAGATACACATGCTACAAGTAACGATGAA
    GATTTTAATAGATATATCATAGAAATTATGAAAATAAGACAACGAGTCATGGAAATGTTA
    CTATTACCTGAACAAAGGCTATTATATAGTGATATGGTTGATCGTATTTTATTCAATAAT
    TCATTAAAATATTATATGAATGAACACCCAGCAGTAACGCACACGACAATTCAACTCGTA
    AAAGACTATATTATGTCTATGCAGCATTCTGATTATGTATCGCAAAACATGTTTGACATT
    ATAAATACAGTTGAATTTATTGGTGAGAATTGGGATAGAGAAATATACGAATTGTGGCGA
    CAAACATTAATTCAAGTGGGCATTAATAGGCCGACTTATAAAAAATTCTTGATACAACTT
    AAAGGGAGAAAGTTTGCACATCGAACAAAATCAATGTTAAAACGATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1008

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA0596 [new locus tag: SA_RS03425 ]
  • symbol: TagX
  • description: teichoic acid biosynthesis protein X
  • length: 335
  • theoretical pI: 6.58891
  • theoretical MW: 39050.9
  • GRAVY: -0.303881

⊟Function[edit | edit source]

  • reaction:
    EC 2.4.-.-?  ExPASy
  • TIGRFAM:
    poly-beta-1,6 N-acetyl-D-glucosamine synthase (TIGR03937; EC 2.4.1.-; HMM-score: 19.6)
  • TheSEED  :
    • Teichoic acid biosynthesis protein X
    Cell Wall and Capsule Gram-Positive cell wall components Teichoic and lipoteichoic acids biosynthesis  Teichoic acid biosynthesis protein X
  • PFAM:
    GT-A (CL0110) Glycos_transf_2; Glycosyl transferase family 2 (PF00535; HMM-score: 25.6)
    and 2 more
    no clan defined Thg1; tRNAHis guanylyltransferase (PF04446; HMM-score: 15.4)
    GT-A (CL0110) Glyco_tranf_2_3; Glycosyltransferase like family 2 (PF13641; HMM-score: 12.2)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular possibility: 1
    • Signal peptide possibility: -1
    • N-terminally Anchored Score: -1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.003127
    • TAT(Tat/SPI): 0.001233
    • LIPO(Sec/SPII): 0.000629
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MLISIESKEHYRILCIDGGSTDQTIPMIERLQRELKHISLIQLQNASIATCINKGLMDIKMTDPHDSDAFMVINPTSIVLPGKLDRLTAAFKNNDNIDMVIGQRAYNYHGEWKLKSADEFIKDNRIVTLTEQPDLLSMMSFDGKLFSAKFAELQCDETLANTYNHAILVKAMQKATDIHLVSQMIVGDNDIDTHATSNDEDFNRYIIEIMKIRQRVMEMLLLPEQRLLYSDMVDRILFNNSLKYYMNEHPAVTHTTIQLVKDYIMSMQHSDYVSQNMFDIINTVEFIGENWDREIYELWRQTLIQVGINRPTYKKFLIQLKGRKFAHRTKSMLKR

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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