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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA0740 [new locus tag: SA_RS04215 ]
- pan locus tag?: SAUPAN002777000
- symbol: SA0740
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA0740 [new locus tag: SA_RS04215 ]
- symbol: SA0740
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 847031..847552
- length: 522
- essential: no DEG other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 1123549 NCBI
- RefSeq: NP_373995 NCBI
- BioCyc: see SA_RS04215
- MicrobesOnline: 103021 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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481ATGATTAATATCATTTCAGCTATAGGATCTATTGGAACATTTATTATGGCTTTATTTTAT
TTTGTATCAGTTTCAGTTCAACTTTATCAAATGAAAATTAGCTTTCTGCCAGCTTTAGGT
TTTAACCAAATTTTATTAGAAAGGGAGAAGGATCAACTTAATATAATGAATTCGGCAACA
GAAGAGCATCATCATAAAGATTATATTAAACTATATAATTTAGGTGGCGGTGCTGCTAAA
AAAATTGCAATAGAGGTTTTATTGGGTAATGATAAAGTCATTCAGAAAAAATACGTGAAT
ATTTTACCTAGTAAAGAAGGGTACATGTTACCAATTAATAAAAATGTGTACGAAGAATTA
GAAAGAACGATTGAGAATAATGGTTATGAAGCTGATTTGAATGTACGTATGACTTATTAT
CATAATGTAAGTCGCAAACAACAGGAAGTTATATTAAAAGGTCAAATCGACCGTTTTAAT
ACTTATAATAATAAAGAAATTTATGATTTGCAGTTTATCTAA60
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522
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA0740 [new locus tag: SA_RS04215 ]
- symbol: SA0740
- description: hypothetical protein
- length: 173
- theoretical pI: 7.78108
- theoretical MW: 20076.1
- GRAVY: -0.209249
⊟Function[edit | edit source]
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helix: 1
- LocateP: N-terminally anchored (No CS)
- Prediction by SwissProt Classification: Membrane
- Pathway Prediction: Sec-(SPI)
- Intracellular possibility: 0.17
- Signal peptide possibility: -1
- N-terminally Anchored Score: 7
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.021863
- TAT(Tat/SPI): 0.000442
- LIPO(Sec/SPII): 0.005071
- predicted transmembrane helices (TMHMM): 1
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MINIISAIGSIGTFIMALFYFVSVSVQLYQMKISFLPALGFNQILLEREKDQLNIMNSATEEHHHKDYIKLYNLGGGAAKKIAIEVLLGNDKVIQKKYVNILPSKEGYMLPINKNVYEELERTIENNGYEADLNVRMTYYHNVSRKQQEVILKGQIDRFNTYNNKEIYDLQFI
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization: data available for COL
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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