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NCBI: 26-AUG-2013

Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA0962 [new locus tag: SA_RS05450 ]
  • pan locus tag?: SAUPAN003340000
  • symbol: SA0962
  • pan gene symbol?: ftsW
  • synonym:
  • product: hypothetical protein

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SA0962 [new locus tag: SA_RS05450 ]
  • symbol: SA0962
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 1089567..1090688
  • length: 1122
  • essential: no DEG other strains

Accession numbers[edit | edit source]

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGTATATAGTGCAAGTATGGTTCCAGCAACTAAAGGCACATTGACTGGTGGTATCGAT
    GTTCCAGGAACGTATTTTTACAACCGACAATTAGCATATGTCATAATGAGTTTTATAATT
    GTATTTTTTATTGCATTTTTAATGAATGTTAAATTACTGAGTAATATTAAAGTGCAAAAA
    GGTATGATTATAACTATCGTCTCACTATTATTACTGACGTTAGTAATAGGTAAAGATATT
    AATGGTTCTAAAAGTTGGATAAACTTAGGATTTATGAATTTACAGGCATCTGAGTTATTA
    AAAATTGCAATCATATTATATATCCCATTTATGATCAGTAAAAAAATGCCTAGAGTATTA
    AGTAAACCAAAATTAATTTTAAGTCCTATTGTATTAGCATTAGGTTGTACGTTTTTAGTT
    TTCTTACAAAAAGACGTAGGGCAAACATTACTAATATTAATTATTTTAGTTGCGATTATT
    TTTTATTCAGGAATTGGGGTAAACAAAGTCCTAAGATTTGGTATACCAGCAGTGCTAGGA
    TTCTTAGTAGTATTTGTCATTGCATTAATGGCTGGTTGGTTACCAAGCTATTTAACTGCC
    AGATTTAGTACGCTAACAGATCCATTCCAATTCGAATCAGGAACTGGATACCATATTTCC
    AATTCATTGCTTGCGATAGGTAACGGTGGCGTATTTGGAAAAGGATTAGGAAATAGTGCA
    ATGAAATTGGGCTATTTACCAGAACCACATACAGATTTTATTTTTGCAATTATTTGCGAA
    GAATTAGGTTTAATCGGAGGATTGCTAGTTATTACTTTAGAGTTCTTTATTGTATATCGT
    GCCTTCCAGTTTGCAAATAAAACATCATCATATTTTTATAAACTTGTGTGTGTTGGGATT
    GCCACATACTTTGGAAGTCAAACGTTTGTAAACATTGGCGGTATTTCGGCAACAATTCCA
    TTAACTGGTGTGCCATTGCCATTTATCAGCTTTGGTGGATCATCAATGATTAGTTTAAGT
    ATTGCTATGGGATTACTTCTGATTGTAGGTAAACAAATCAAAGTAGACCAGCAACGAAAG
    AAACAACAACAAAAAGTTGATATAAGAAGACAATTTAATTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1122

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SA0962 [new locus tag: SA_RS05450 ]
  • symbol: SA0962
  • description: hypothetical protein
  • length: 373
  • theoretical pI: 10.2855
  • theoretical MW: 40823.8
  • GRAVY: 0.814745

Function[edit | edit source]

  • TIGRFAM:
    Cell structure Cell envelope Biosynthesis and degradation of murein sacculus and peptidoglycan cell division protein FtsW (TIGR02614; HMM-score: 278.5)
    Cellular processes Cellular processes Cell division cell division protein FtsW (TIGR02614; HMM-score: 278.5)
    Cell structure Cell envelope Biosynthesis and degradation of murein sacculus and peptidoglycan rod shape-determining protein RodA (TIGR02210; HMM-score: 258.2)
    Cellular processes Cellular processes Cell division rod shape-determining protein RodA (TIGR02210; HMM-score: 258.2)
    and 2 more
    Cell structure Cell envelope Biosynthesis and degradation of murein sacculus and peptidoglycan stage V sporulation protein E (TIGR02615; HMM-score: 221.6)
    Cellular processes Cellular processes Sporulation and germination stage V sporulation protein E (TIGR02615; HMM-score: 221.6)
  • TheSEED:  
    Cell Division and Cell Cycle Cell Division and Cell Cycle - no subcategory Bacterial Cytoskeleton  Cell division protein FtsW
    and 3 more
    Clustering-based subsystems Cell Division cell division cluster containing FtsQ  Cell division protein FtsW
    Bacterial Cell Division  Cell division protein FtsW
    RP Bacterial Cell Division  Cell division protein FtsW
  • PFAM:
    Membrane_trans (CL0142) FTSW_RODA_SPOVE; Cell cycle protein (PF01098; HMM-score: 293.5)
    and 1 more
    no clan defined IncA; IncA protein (PF04156; HMM-score: 12.1)

Structure, modifications & interactions[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 9
  • LocateP: Multi-transmembrane
    • Prediction by SwissProt Classification: Membrane
    • Pathway Prediction: Sec-(SPI)
    • Intracellular possibility: 0.17
    • Signal peptide possibility: -1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.003466
    • TAT(Tat/SPI): 0.000166
    • LIPO(Sec/SPII): 0.027502
  • predicted transmembrane helices (TMHMM): 9

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

  • MVYSASMVPATKGTLTGGIDVPGTYFYNRQLAYVIMSFIIVFFIAFLMNVKLLSNIKVQKGMIITIVSLLLLTLVIGKDINGSKSWINLGFMNLQASELLKIAIILYIPFMISKKMPRVLSKPKLILSPIVLALGCTFLVFLQKDVGQTLLILIILVAIIFYSGIGVNKVLRFGIPAVLGFLVVFVIALMAGWLPSYLTARFSTLTDPFQFESGTGYHISNSLLAIGNGGVFGKGLGNSAMKLGYLPEPHTDFIFAIICEELGLIGGLLVITLEFFIVYRAFQFANKTSSYFYKLVCVGIATYFGSQTFVNIGGISATIPLTGVPLPFISFGGSSMISLSIAMGLLLIVGKQIKVDQQRKKQQQKVDIRRQFN

Experimental data[edit | edit source]

  • experimentally validated: no data available

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

  • SA0962 no polycistronic organisation predicted

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]